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Protein
Homologs
Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A0751 and Rru_A0752 are separated by 585 nucleotides
Rru_A0752 and Rru_A0753 are separated by 226 nucleotides
Rru_A0753 and Rru_A0754 overlap by 4 nucleotides
Rru_A0754 and Rru_A0755 are separated by 63 nucleotides
Rru_A0751: Rru_A0751 - Modification methylase HemK (NCBI), at 880,072 to 881,049
_A0751
Rru_A0752: Rru_A0752 - hypothetical protein (NCBI), at 881,635 to 882,582
_A0752
Rru_A0753: Rru_A0753 - Chaperone clpB (NCBI), at 882,809 to 885,421
_A0753
Rru_A0754: Rru_A0754 - hypothetical protein (NCBI), at 885,418 to 886,488
_A0754
Rru_A0755: Rru_A0755 - chemotaxis sensory transducer (NCBI), at 886,552 to 888,255
_A0755
Group
Condition
Rru
_A0751
Rru
_A0752
Rru
_A0753
Rru
_A0754
Rru
_A0755
carbon source
Hexanoic 21 mM; anaerobic
N.D.
-6.1
-1.5
-0.1
+0.5
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
N.D.
-3.8
-2.2
-0.6
-0.3
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
-4.8
-0.3
+0.2
-0.1
carbon source
Valeric 25 mM; anaerobic
N.D.
-4.7
-0.4
+0.5
-0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
-3.6
-1.2
-0.2
+1.0
carbon source
Hexanoic 21 mM; anaerobic
N.D.
-2.9
-0.4
-0.0
-0.2
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
-2.5
-1.0
+0.1
+0.2
carbon source
Hexanoic 21 mM; anaerobic
N.D.
-2.1
-1.0
-0.1
+0.3
carbon source
Valeric 25 mM; anaerobic
N.D.
-1.4
-1.3
-0.6
+0.5
carbon source
Valeric 25 mM; anaerobic
N.D.
-2.0
-0.9
-0.1
+0.3
smn_rich
SMN_rich
N.D.
-2.5
-0.2
+0.0
+0.2
light
Succinic Acid; Light intensity 75 uM
N.D.
-1.6
-0.6
+0.2
-0.4
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
-2.2
-0.1
+0.2
-0.1
carbon source
Hexanoic 21 mM; anaerobic
N.D.
-2.8
+0.1
-0.1
+0.5
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
N.D.
-1.3
-0.4
+0.1
-0.1
carbon source
Succinate (C)
N.D.
-1.6
-0.1
+0.1
+0.0
smn_rich
SMN_rich
N.D.
-1.4
-0.2
+0.0
+0.1
carbon source
Hexanoic 21 mM; anaerobic
N.D.
-1.2
-0.4
-0.1
+0.2
light
Succinic Acid; Light intensity 9 uM
N.D.
-1.2
-0.5
-0.1
+0.4
light
Succinic Acid; Light intensity 18 uM
N.D.
-0.6
-0.4
+0.4
-0.6
light
Succinic Acid; Light intensity 9 uM
N.D.
-1.1
-0.5
+0.0
+0.5
light
acetate; Light intensity 9 uM
N.D.
-1.1
-0.7
+0.2
+0.7
light
acetate; Light intensity 38 uM
N.D.
-0.9
-0.5
+0.1
+0.5
light
Succinic Acid; Light intensity 18 uM
N.D.
-0.8
-0.4
-0.1
+0.8
smn_rich
SMN_rich_noKan
N.D.
-0.7
-0.2
-0.3
+0.6
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
+1.0
-0.0
+0.3
+0.8
light
acetate; Light intensity 38 uM
N.D.
+1.3
+0.8
-0.0
+0.2
light
acetate; Light intensity 18 uM
N.D.
+1.6
+0.9
-0.1
+0.4
light
Succinic Acid; Light intensity 150 uM
N.D.
+1.5
+1.1
-0.0
+0.7
light
Succinic Acid; Light intensity 150 uM
N.D.
+1.2
+2.1
+0.0
+1.3
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