Fitness for 5 genes in Rhodospirillum rubrum S1H

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500 ntRru_A0744 and Rru_A0745 are separated by 25 nucleotidesRru_A0745 and Rru_A0746 are separated by 217 nucleotidesRru_A0746 and Rru_A0747 are separated by 134 nucleotidesRru_A0747 and Rru_A0748 are separated by 126 nucleotides Rru_A0744: Rru_A0744 - 2-nitropropane dioxygenase, NPD (NCBI), at 869,898 to 870,962 _A0744 Rru_A0745: Rru_A0745 - PTSINtr with GAF domain, PtsP (NCBI), at 870,988 to 873,255 _A0745 Rru_A0746: Rru_A0746 - hypothetical protein (NCBI), at 873,473 to 875,005 _A0746 Rru_A0747: Rru_A0747 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (NCBI), at 875,140 to 876,294 _A0747 Rru_A0748: Rru_A0748 - Histidyl-tRNA synthetase, class IIa (NCBI), at 876,421 to 877,668 _A0748
Group Condition Rru_A0744 Rru_A0745 Rru_A0746 Rru_A0747 Rru_A0748
carbon source Hexanoic 21 mM; anaerobic N.D. -0.6 -3.0 N.D. N.D.
carbon source Succinic Acid 31.25 mM; anaerobic N.D. -0.5 -0.6 N.D. N.D.
carbon source Hexanoic 21 mM; anaerobic N.D. -0.7 -0.3 N.D. N.D.
carbon source Hexanoic 21 mM; anaerobic N.D. -0.7 -0.3 N.D. N.D.
smn_rich SMN_rich_noKan N.D. +0.2 -0.9 N.D. N.D.
carbon source Succinate (C)_noKan N.D. +0.3 -1.0 N.D. N.D.
carbon source Valeric 25 mM; anaerobic N.D. +0.4 -0.6 N.D. N.D.
carbon source Succinate (C) N.D. +0.3 -0.5 N.D. N.D.
smn_rich SMN_rich N.D. +0.4 -0.6 N.D. N.D.
light acetate; Light intensity 18 uM N.D. -0.9 +0.9 N.D. N.D.
light Succinic Acid; Light intensity 18 uM N.D. +0.8 -0.5 N.D. N.D.
carbon source carbon source anaerobic Succinic Acid 31.25 mM N.D. -1.7 +2.0 N.D. N.D.
light Succinic Acid; Light intensity 75 uM N.D. -0.5 +0.8 N.D. N.D.
light Succinic Acid; Light intensity 18 uM N.D. -0.8 +1.4 N.D. N.D.
light Succinic Acid; Light intensity 9 uM N.D. -0.1 +0.9 N.D. N.D.
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light N.D. +0.2 +0.8 N.D. N.D.
carbon source Hexanoic 21 mM; anaerobic N.D. +0.2 +0.9 N.D. N.D.
anaerboic nitrogen source L-Malic Acid (C) and N2; no light N.D. +1.0 +0.1 N.D. N.D.
anaerboic nitrogen source L-Malic Acid (C) and N2; no light N.D. +1.0 +0.1 N.D. N.D.
light acetate; Light intensity 75 uM N.D. -0.6 +1.8 N.D. N.D.
carbon source Valeric 25 mM; anaerobic N.D. +0.5 +0.8 N.D. N.D.
carbon source Succinic Acid 31.25 mM; anaerobic N.D. +0.6 +0.6 N.D. N.D.
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light N.D. +0.3 +1.0 N.D. N.D.
light acetate; Light intensity 18 uM N.D. +0.1 +1.5 N.D. N.D.
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light N.D. +1.4 +0.2 N.D. N.D.
carbon source Succinic Acid 31.25 mM; anaerobic N.D. +1.0 +0.7 N.D. N.D.
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light N.D. +1.5 +0.2 N.D. N.D.
light acetate; Light intensity 38 uM N.D. -0.7 +2.6 N.D. N.D.
light Succinic Acid; Light intensity 150 uM N.D. +0.0 +2.9 N.D. N.D.
light Succinic Acid; Light intensity 150 uM N.D. -0.4 +3.9 N.D. N.D.
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