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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A0701 and Rru_A0702 are separated by 156 nucleotides
Rru_A0702 and Rru_A0703 are separated by 3 nucleotides
Rru_A0703 and Rru_A0704 are separated by 72 nucleotides
Rru_A0704 and Rru_A0705 are separated by 191 nucleotides
Rru_A0701: Rru_A0701 - Ribosomal protein S4 (NCBI), at 830,110 to 830,724
_A0701
Rru_A0702: Rru_A0702 - Molybdate ABC transporter, ATP-binding protein (NCBI), at 830,881 to 831,993
_A0702
Rru_A0703: Rru_A0703 - Molybdate ABC transporter, permease protein (NCBI), at 831,997 to 832,689
_A0703
Rru_A0704: Rru_A0704 - Molybdenum ABC transporter, periplasmic binding protein (NCBI), at 832,762 to 833,538
_A0704
Rru_A0705: Rru_A0705 - Glutaredoxin-related protein (NCBI), at 833,730 to 834,059
_A0705
Group
Condition
Rru
_A0701
Rru
_A0702
Rru
_A0703
Rru
_A0704
Rru
_A0705
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
N.D.
-0.4
-0.6
-0.1
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
N.D.
-0.4
-0.5
-0.1
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
-0.7
+0.1
-0.1
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
-0.7
+0.1
-0.1
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
-0.3
-0.3
-0.0
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
+0.2
-0.8
-0.0
N.D.
carbon source
Succinate (C)
N.D.
-0.4
-0.1
+0.0
N.D.
carbon source
Succinate (C)_noKan
N.D.
-0.2
+0.1
-0.2
N.D.
carbon source
Hexanoic 21 mM; anaerobic
N.D.
-0.1
-0.4
+0.2
N.D.
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
N.D.
-0.6
+0.1
+0.3
N.D.
carbon source
Valeric 25 mM; anaerobic
N.D.
-0.3
+0.2
-0.1
N.D.
carbon source
Hexanoic 21 mM; anaerobic
N.D.
-0.4
+0.3
-0.0
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
-0.5
+0.2
+0.2
N.D.
smn_rich
SMN_rich_noKan
N.D.
-0.1
-0.3
+0.2
N.D.
light
Succinic Acid; Light intensity 18 uM
N.D.
-0.0
-0.4
+0.3
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
N.D.
+0.3
+0.1
-0.2
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
-0.8
+0.8
+0.2
N.D.
light
Succinic Acid; Light intensity 38 uM
N.D.
-0.0
-0.1
+0.4
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
-0.1
-0.1
+0.5
N.D.
light
acetate; Light intensity 38 uM
N.D.
+0.3
+0.2
-0.1
N.D.
light
acetate; Light intensity 9 uM
N.D.
+0.1
+0.3
+0.0
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
+0.2
+0.2
+0.2
N.D.
light
acetate; Light intensity 75 uM
N.D.
+0.5
+0.1
-0.1
N.D.
light
Succinic Acid; Light intensity 150 uM
N.D.
-0.0
+0.7
-0.1
N.D.
light
acetate; Light intensity 18 uM
N.D.
+0.0
+0.6
-0.0
N.D.
light
Succinic Acid; Light intensity 150 uM
N.D.
-0.1
+1.1
-0.2
N.D.
light
Succinic Acid; Light intensity 18 uM
N.D.
+0.5
+0.3
-0.1
N.D.
carbon source
Valeric 25 mM; anaerobic
N.D.
+0.0
+0.9
-0.1
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
+0.2
+0.6
+0.0
N.D.
light
acetate; Light intensity 18 uM
N.D.
+0.5
+0.5
+0.3
N.D.
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