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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A0672 and Rru_AR0017 are separated by 217 nucleotides
Rru_AR0017 and Rru_A0673 are separated by 44 nucleotides
Rru_A0673 and Rru_A0674 are separated by 57 nucleotides
Rru_A0674 and Rru_A0675 are separated by 805 nucleotides
Rru_A0672: Rru_A0672 - hypothetical protein (NCBI), at 794,877 to 795,188
_A0672
Rru_AR0017: Rru_AR0017 - tRNA-Ser (NCBI), at 795,406 to 795,496
_AR0017
Rru_A0673: Rru_A0673 - hypothetical protein (NCBI), at 795,541 to 795,846
_A0673
Rru_A0674: Rru_A0674 - Phage integrase (NCBI), at 795,904 to 797,064
_A0674
Rru_A0675: Rru_A0675 - hypothetical protein (NCBI), at 797,870 to 798,844
_A0675
Group
Condition
Rru
_A0672
Rru
_AR0017
Rru
_A0673
Rru
_A0674
Rru
_A0675
light
Succinic Acid; Light intensity 18 uM
-0.7
N.D.
-0.9
+0.1
-0.4
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.4
N.D.
-0.9
-0.2
-0.4
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.4
N.D.
-0.7
-0.3
-0.3
light
Succinic Acid; Light intensity 150 uM
+0.3
N.D.
-0.9
-0.1
-0.8
light
Succinic Acid; Light intensity 150 uM
-0.2
N.D.
-0.3
-0.2
-0.2
light
acetate; Light intensity 38 uM
-0.7
N.D.
-0.5
+0.1
+0.5
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
-0.4
N.D.
+0.0
-0.0
-0.2
carbon source
Valeric 25 mM; anaerobic
-0.7
N.D.
-0.1
-0.0
+0.2
light
Succinic Acid; Light intensity 9 uM
+0.0
N.D.
-0.5
+0.2
-0.2
carbon source
Succinic Acid 31.25 mM; anaerobic
-1.2
N.D.
+0.1
-0.0
+0.6
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
-0.5
N.D.
+0.1
-0.1
+0.0
carbon source
Hexanoic 21 mM; anaerobic
+0.0
N.D.
-0.4
-0.2
+0.3
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
-0.5
N.D.
+0.1
-0.0
+0.2
light
Succinic Acid; Light intensity 75 uM
+0.2
N.D.
-0.3
+0.2
-0.3
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.3
N.D.
+0.2
-0.1
+0.1
carbon source
Hexanoic 21 mM; anaerobic
-0.6
N.D.
+0.4
+0.2
-0.0
light
acetate; Light intensity 75 uM
+0.4
N.D.
-0.1
-0.2
-0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.2
N.D.
+0.0
-0.1
+0.3
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.4
N.D.
-0.2
-0.0
-0.1
light
acetate; Light intensity 18 uM
+0.6
N.D.
-0.1
-0.3
-0.1
carbon source
Hexanoic 21 mM; anaerobic
-0.5
N.D.
+0.6
+0.2
+0.1
carbon source
Valeric 25 mM; anaerobic
-0.3
N.D.
+0.3
+0.2
+0.2
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
+1.2
N.D.
-0.8
-0.1
+0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.9
N.D.
-0.4
+0.0
-0.0
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.2
N.D.
+0.5
-0.1
+0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.8
N.D.
+0.2
+0.1
+0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.6
N.D.
+0.3
+0.1
+0.3
light
acetate; Light intensity 18 uM
+1.6
N.D.
-0.1
-0.2
+0.0
carbon source
Valeric 25 mM; anaerobic
+0.7
N.D.
+0.4
+0.1
+0.3
light
Succinic Acid; Light intensity 18 uM
+1.3
N.D.
+0.4
+0.0
+0.2
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