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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A0664 and Rru_A0665 are separated by 0 nucleotides
Rru_A0665 and Rru_A0666 overlap by 4 nucleotides
Rru_A0666 and Rru_A0667 are separated by 26 nucleotides
Rru_A0667 and Rru_A0668 are separated by 118 nucleotides
Rru_A0664: Rru_A0664 - Signal Transduction Histidine Kinase (NCBI), at 787,203 to 788,237
_A0664
Rru_A0665: Rru_A0665 - Response regulator receiver domain protein (CheY) (NCBI), at 788,238 to 788,684
_A0665
Rru_A0666: Rru_A0666 - Multi-sensor Signal Transduction Histidine Kinase (NCBI), at 788,681 to 790,420
_A0666
Rru_A0667: Rru_A0667 - Nicotinate-nucleotide-dimethylbenzimidazolephosphoribosyltransferase (NCBI), at 790,447 to 791,454
_A0667
Rru_A0668: Rru_A0668 - Cobalamin-5-phosphate synthase CobS (NCBI), at 791,573 to 792,358
_A0668
Group
Condition
Rru
_A0664
Rru
_A0665
Rru
_A0666
Rru
_A0667
Rru
_A0668
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
-1.0
+0.3
-0.9
-3.7
-3.3
carbon source
Hexanoic 21 mM; anaerobic
-0.1
-0.7
-0.3
-1.1
-5.4
carbon source
Valeric 25 mM; anaerobic
+0.1
-1.5
-0.2
-0.6
-4.4
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.0
+0.7
-0.1
+0.2
-5.0
smn_rich
SMN_rich
+0.1
-1.7
-0.0
-0.4
-2.0
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.0
-0.9
-0.2
-1.6
-1.4
light
Succinic Acid; Light intensity 38 uM
-0.0
-0.3
-0.2
-0.7
-2.4
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.2
-0.3
-0.1
+0.1
-3.2
light
acetate; Light intensity 9 uM
-0.2
-0.6
-0.3
-0.1
-2.3
light
Succinic Acid; Light intensity 18 uM
+0.1
-0.7
+0.1
-0.9
-1.7
light
Succinic Acid; Light intensity 9 uM
+0.1
-0.2
-0.1
-0.1
-2.4
light
acetate; Light intensity 38 uM
-0.3
-0.2
-0.2
-0.3
-1.5
light
Succinic Acid; Light intensity 75 uM
+0.0
-0.5
-0.3
-0.1
-1.5
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.0
-0.4
-0.1
-0.7
-1.0
smn_rich
SMN_rich
+0.1
+0.4
-0.1
-0.4
-2.2
light
acetate; Light intensity 18 uM
-0.6
-0.4
-0.4
+0.9
-1.6
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.0
+0.2
-0.2
+0.7
-2.3
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.1
+0.2
-0.1
-1.5
+0.2
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.2
+0.2
-0.1
-1.3
+0.2
light
Succinic Acid; Light intensity 75 uM
-0.0
-0.9
-0.2
+0.6
-0.5
carbon source
Hexanoic 21 mM; anaerobic
-0.4
+0.7
-0.1
-0.3
-0.8
light
Succinic Acid; Light intensity 18 uM
+0.1
+0.5
-0.2
+0.4
-1.5
carbon source
Hexanoic 21 mM; anaerobic
-0.3
+0.6
-0.2
+0.3
-0.9
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.2
+0.4
+0.1
+0.4
-1.2
carbon source
Hexanoic 21 mM; anaerobic
-0.3
+1.5
-0.2
-0.8
-0.6
carbon source
Valeric 25 mM; anaerobic
-0.1
+0.7
+0.0
+0.3
-1.0
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.1
+0.8
-0.4
-1.1
+0.8
light
acetate; Light intensity 38 uM
-0.3
-0.4
-0.3
+1.5
+1.0
light
acetate; Light intensity 18 uM
-0.1
+0.7
+0.1
+0.4
+0.7
light
Succinic Acid; Light intensity 150 uM
-0.1
+1.3
-0.2
+2.5
+2.4
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