Fitness for 5 genes in Rhodospirillum rubrum S1H

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500 ntRru_A0659 and Rru_A0660 overlap by 4 nucleotidesRru_A0660 and Rru_A0661 are separated by 172 nucleotidesRru_A0661 and Rru_A0662 are separated by 14 nucleotidesRru_A0662 and Rru_A0663 are separated by 405 nucleotides Rru_A0659: Rru_A0659 - Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with Response Regulator Receiver modulation (NCBI), at 781,071 to 783,371 _A0659 Rru_A0660: Rru_A0660 - Periplasmic Sensor Signal Transduction Histidine Kinase (NCBI), at 783,368 to 785,245 _A0660 Rru_A0661: Rru_A0661 - Hly-III related proteins (NCBI), at 785,418 to 786,056 _A0661 Rru_A0662: Rru_A0662 - Translation initiation factor IF-1 (NCBI), at 786,071 to 786,358 _A0662 Rru_A0663: Rru_A0663 - Cold-shock DNA-binding domain protein (NCBI), at 786,764 to 786,970 _A0663
Group Condition Rru_A0659 Rru_A0660 Rru_A0661 Rru_A0662 Rru_A0663
smn_rich SMN_rich +0.1 +0.1 -0.7 N.D. -1.6
carbon source Hexanoic 21 mM; anaerobic -0.3 +0.4 -0.7 N.D. -1.0
carbon source Succinic Acid 31.25 mM; anaerobic +0.1 +0.4 +0.2 N.D. -1.9
carbon source carbon source anaerobic Succinic Acid 31.25 mM -0.4 -0.5 +0.2 N.D. -0.4
carbon source Succinate (C) +0.1 +0.2 -0.2 N.D. -1.2
anaerboic nitrogen source Low light with N2 -0.0 +0.3 -0.4 N.D. -0.9
carbon source Succinate (C) +0.0 +0.2 -0.2 N.D. -0.8
carbon source Succinate (C)_noKan +0.1 +0.0 -0.7 N.D. -0.3
smn_rich SMN_rich -0.0 +0.3 -0.6 N.D. -0.5
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light +0.0 -0.3 +0.4 N.D. -1.0
anaerboic nitrogen source SMN_rich_anaerobic +0.1 +0.1 -0.4 N.D. -0.5
smn_rich SMN_rich_noKan +0.1 +0.2 -0.7 N.D. -0.2
carbon source Valeric 25 mM; anaerobic -0.2 +0.2 +0.7 N.D. -1.2
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light +0.3 +0.1 -0.9 N.D. +0.2
carbon source Valeric 25 mM; anaerobic +0.3 +0.4 -0.1 N.D. -0.5
smn_rich SMN_rich +0.2 -0.1 -0.4 N.D. +0.4
light Succinic Acid; Light intensity 9 uM +0.1 +0.3 -0.3 N.D. +0.3
light Succinic Acid; Light intensity 75 uM +0.1 +0.3 -0.2 N.D. +0.6
light Succinic Acid; Light intensity 18 uM +0.8 -1.4 +0.4 N.D. +1.2
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light +0.2 +0.8 -0.5 N.D. +0.8
light Succinic Acid; Light intensity 18 uM -0.5 +1.5 +0.4 N.D. -0.1
light acetate; Light intensity 75 uM -0.0 +0.7 +0.4 N.D. +0.3
light Succinic Acid; Light intensity 9 uM +0.1 +0.1 +0.5 N.D. +0.9
light Succinic Acid; Light intensity 150 uM -0.0 +1.2 -0.0 N.D. +0.5
carbon source Succinic Acid 31.25 mM; anaerobic -0.1 -0.0 +1.1 N.D. +0.8
light Succinic Acid; Light intensity 150 uM +0.2 +1.7 +0.3 N.D. -0.2
light acetate; Light intensity 18 uM +0.2 +0.7 +0.4 N.D. +0.7
light Succinic Acid; Light intensity 75 uM +0.2 +0.3 +0.9 N.D. +1.2
light acetate; Light intensity 38 uM +0.4 +0.7 +1.5 N.D. +0.7
light acetate; Light intensity 18 uM +0.1 +0.1 +0.2 N.D. +6.6
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