Fitness for 5 genes in Rhodospirillum rubrum S1H

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500 ntRru_A0645 and Rru_A0646 are separated by 87 nucleotidesRru_A0646 and Rru_A0647 overlap by 4 nucleotidesRru_A0647 and Rru_A0648 are separated by 52 nucleotidesRru_A0648 and Rru_A0649 are separated by 3 nucleotides Rru_A0645: Rru_A0645 - Ribose-phosphate pyrophosphokinase (NCBI), at 766,783 to 767,715 _A0645 Rru_A0646: Rru_A0646 - Phosphoribosylamine--glycine ligase (NCBI), at 767,803 to 769,113 _A0646 Rru_A0647: Rru_A0647 - Pyridoxal-5'-phosphate-dependent enzyme, beta subunit (NCBI), at 769,110 to 770,102 _A0647 Rru_A0648: Rru_A0648 - hypothetical protein (NCBI), at 770,155 to 770,793 _A0648 Rru_A0649: Rru_A0649 - hypothetical protein (NCBI), at 770,797 to 771,291 _A0649
Group Condition Rru_A0645 Rru_A0646 Rru_A0647 Rru_A0648 Rru_A0649
light Succinic Acid; Light intensity 18 uM -2.4 N.D. -0.8 -0.2 -0.6
carbon source Hexanoic 21 mM; anaerobic +0.1 N.D. -0.4 -0.2 -0.8
carbon source Succinate (C)_noKan -0.4 N.D. -0.5 -0.2 -0.0
carbon source Hexanoic 21 mM; anaerobic +0.7 N.D. -1.1 -0.3 -0.4
anaerboic nitrogen source SMN_rich_anaerobic -0.8 N.D. +0.0 +0.0 -0.3
light acetate; Light intensity 38 uM -0.8 N.D. -0.6 -0.1 +0.5
carbon source Succinic Acid 31.25 mM; anaerobic +0.3 N.D. +0.0 -0.1 -0.8
smn_rich SMN_rich_noKan -0.8 N.D. +0.2 +0.1 +0.0
carbon source Succinate (C)_noKan -0.7 N.D. +0.1 -0.1 +0.3
carbon source Hexanoic 21 mM; anaerobic -0.3 N.D. +0.3 +0.0 -0.5
carbon source Valeric 25 mM; anaerobic +0.2 N.D. -0.4 +0.2 -0.4
carbon source Succinate (C) -0.4 N.D. +0.5 +0.0 -0.4
light Succinic Acid; Light intensity 150 uM -1.2 N.D. -1.0 +0.2 +1.7
anaerboic nitrogen source L-Malic Acid (C) and N2; anaerobic; high light -0.3 N.D. +0.7 -0.1 -0.4
light acetate; Light intensity 38 uM -0.8 N.D. +0.2 +0.0 +0.5
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light -0.4 N.D. +0.8 -0.2 +0.0
carbon source Valeric 25 mM; anaerobic +0.6 N.D. -0.7 +0.0 +0.4
smn_rich SMN_rich -0.5 N.D. +0.5 +0.2 +0.1
anaerboic nitrogen source L-Malic Acid (C) and N2; anaerobic; high light +0.8 N.D. +0.0 -0.1 -0.2
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light +0.7 N.D. +0.1 +0.1 -0.3
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light +0.8 N.D. +0.1 +0.0 -0.2
light Succinic Acid; Light intensity 18 uM +1.1 N.D. +0.3 +0.2 -0.9
light acetate; Light intensity 75 uM +0.5 N.D. -0.3 -0.0 +0.7
light Succinic Acid; Light intensity 150 uM -0.4 N.D. +0.3 -0.1 +1.2
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light +0.5 N.D. +0.1 +0.1 +0.3
carbon source carbon source anaerobic Succinic Acid 31.25 mM +0.1 N.D. +1.5 -0.4 +0.0
carbon source Hexanoic 21 mM; anaerobic +0.5 N.D. +1.0 -0.4 +0.2
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light +0.6 N.D. +0.2 +0.1 +0.5
light acetate; Light intensity 18 uM +0.8 N.D. +0.5 +0.1 +0.4
light acetate; Light intensity 18 uM +1.0 N.D. +0.2 +0.0 +0.6
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