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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A0577 and Rru_A0578 are separated by 234 nucleotides
Rru_A0578 and Rru_A0579 are separated by 46 nucleotides
Rru_A0579 and Rru_A0580 are separated by 91 nucleotides
Rru_A0580 and Rru_A0581 are separated by 173 nucleotides
Rru_A0577: Rru_A0577 - hypothetical protein (NCBI), at 685,999 to 686,970
_A0577
Rru_A0578: Rru_A0578 - Metallophosphoesterase (NCBI), at 687,205 to 688,182
_A0578
Rru_A0579: Rru_A0579 - Glycosyl transferase, group 1 (NCBI), at 688,229 to 689,302
_A0579
Rru_A0580: Rru_A0580 - OsmC-like protein (NCBI), at 689,394 to 689,828
_A0580
Rru_A0581: Rru_A0581 - Three-deoxy-D-manno-octulosonic-acidtransferase-like (NCBI), at 690,002 to 691,318
_A0581
Group
Condition
Rru
_A0577
Rru
_A0578
Rru
_A0579
Rru
_A0580
Rru
_A0581
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.6
-0.7
-0.3
-0.8
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.5
-0.5
-0.3
-1.0
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.0
+0.0
+0.1
-1.7
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
-0.6
-0.4
-0.2
-0.4
N.D.
light
Succinic Acid; Light intensity 9 uM
-0.1
-0.1
+0.1
-1.3
N.D.
carbon source
Hexanoic 21 mM; anaerobic
-0.3
+0.1
+0.0
-1.1
N.D.
light
Succinic Acid; Light intensity 75 uM
-0.3
-0.1
+0.1
-0.8
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
-0.3
-0.2
-0.1
-0.6
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.4
-0.5
+0.1
-0.4
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
-0.3
-0.2
-0.2
-0.3
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.5
-0.1
-0.2
-0.3
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
-0.4
-0.1
-0.1
-0.3
N.D.
light
Succinic Acid; Light intensity 9 uM
-0.1
-0.4
-0.0
-0.3
N.D.
light
Succinic Acid; Light intensity 18 uM
-0.1
-0.2
-0.0
-0.6
N.D.
light
acetate; Light intensity 38 uM
+0.1
-0.3
-0.0
-0.4
N.D.
carbon source
Valeric 25 mM; anaerobic
+0.1
+0.0
+0.3
-1.1
N.D.
light
acetate; Light intensity 9 uM
-0.6
-0.2
-0.0
+0.3
N.D.
carbon source
Hexanoic 21 mM; anaerobic
+0.2
+0.1
+0.2
-0.9
N.D.
carbon source
Valeric 25 mM; anaerobic
+0.3
+0.1
-0.0
-0.8
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.1
+0.1
+0.3
-0.7
N.D.
light
Succinic Acid; Light intensity 18 uM
-0.7
+0.1
+0.4
+0.1
N.D.
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
+0.8
-0.4
+0.4
-0.6
N.D.
light
acetate; Light intensity 75 uM
+0.1
-0.2
-0.2
+0.4
N.D.
carbon source
Hexanoic 21 mM; anaerobic
+0.3
-0.2
-0.2
+0.2
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.2
+0.4
-0.1
-0.2
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.7
-0.1
-0.2
+0.0
N.D.
light
Succinic Acid; Light intensity 150 uM
+0.1
-0.2
-0.1
+0.8
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.2
-0.0
-0.1
+0.6
N.D.
light
acetate; Light intensity 18 uM
+0.2
+0.1
+0.2
+0.7
N.D.
light
Succinic Acid; Light intensity 150 uM
+0.7
-0.1
-0.0
+0.6
N.D.
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