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Protein
Homologs
Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A0573 and Rru_A0574 are separated by 108 nucleotides
Rru_A0574 and Rru_A0575 are separated by 123 nucleotides
Rru_A0575 and Rru_A0576 are separated by 111 nucleotides
Rru_A0576 and Rru_A0577 are separated by 23 nucleotides
Rru_A0573: Rru_A0573 - hypothetical protein (NCBI), at 680,033 to 680,683
_A0573
Rru_A0574: Rru_A0574 - Carboxylyase-related protein (NCBI), at 680,792 to 682,315
_A0574
Rru_A0575: Rru_A0575 - Peptidase U62, modulator of DNA gyrase (NCBI), at 682,439 to 683,797
_A0575
Rru_A0576: Rru_A0576 - chemotaxis sensory transducer (NCBI), at 683,909 to 685,975
_A0576
Rru_A0577: Rru_A0577 - hypothetical protein (NCBI), at 685,999 to 686,970
_A0577
Group
Condition
Rru
_A0573
Rru
_A0574
Rru
_A0575
Rru
_A0576
Rru
_A0577
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.4
-5.0
-0.5
+0.2
-0.0
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.1
-4.9
+0.0
-0.4
-0.4
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.2
-5.5
-0.0
+0.0
+0.2
carbon source
Hexanoic 21 mM; anaerobic
-0.3
-4.9
-0.2
+0.5
+0.0
carbon source
Hexanoic 21 mM; anaerobic
-0.9
-4.9
+0.2
+0.7
-0.2
carbon source
Valeric 25 mM; anaerobic
-0.0
-5.0
+0.1
+0.5
-0.3
carbon source
Hexanoic 21 mM; anaerobic
-0.6
-5.0
+0.5
+0.6
-0.3
carbon source
Hexanoic 21 mM; anaerobic
+0.0
-3.8
-0.1
-1.1
+0.3
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
+0.1
-4.3
+0.0
+0.2
-0.0
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.1
-4.2
-0.1
+0.3
+0.2
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.1
-3.8
+0.2
+0.1
+0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.6
-2.0
+0.0
+0.1
-0.6
smn_rich
SMN_rich
+0.1
-3.1
-0.0
-0.3
+0.2
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.3
-2.1
-0.4
-1.5
+0.7
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
+0.1
-3.3
-0.1
+0.3
-0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.6
-1.8
-0.0
+0.1
-0.5
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.0
-3.0
-0.3
+0.4
+0.1
carbon source
Hexanoic 21 mM; anaerobic
-0.2
-2.9
+0.0
+0.6
+0.2
carbon source
Valeric 25 mM; anaerobic
-1.0
-2.4
+0.1
+0.7
+0.3
carbon source
Succinate (C)
-0.2
-1.3
-0.2
-0.2
-0.4
carbon source
Valeric 25 mM; anaerobic
-0.2
-1.3
+0.0
-0.6
+0.3
carbon source
Valeric 25 mM; anaerobic
+0.1
-2.0
-0.1
+0.4
+0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.2
-1.2
-0.3
+0.8
+0.2
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
-0.1
-1.2
+0.9
-0.2
+0.8
light
Succinic Acid; Light intensity 18 uM
+0.5
-0.3
+0.3
+0.7
-0.7
light
acetate; Light intensity 18 uM
-0.5
+0.9
+0.6
+0.6
-0.1
light
acetate; Light intensity 75 uM
-0.1
+1.6
+0.2
+0.6
+0.1
light
acetate; Light intensity 38 uM
-1.0
+2.1
+1.8
+0.4
+0.1
light
Succinic Acid; Light intensity 150 uM
-0.2
+2.9
+0.1
+0.3
+0.7
light
Succinic Acid; Light intensity 150 uM
-0.7
+4.2
+0.1
+0.6
+0.1
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Rru_A0575
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