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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A0565 and Rru_A0566 are separated by 185 nucleotides
Rru_A0566 and Rru_A0567 are separated by 278 nucleotides
Rru_A0567 and Rru_A0568 are separated by 94 nucleotides
Rru_A0568 and Rru_A0569 are separated by 260 nucleotides
Rru_A0565: Rru_A0565 - hypothetical protein (NCBI), at 668,233 to 668,568
_A0565
Rru_A0566: Rru_A0566 - hypothetical protein (NCBI), at 668,754 to 672,314
_A0566
Rru_A0567: Rru_A0567 - Peptidase U62, modulator of DNA gyrase (NCBI), at 672,593 to 674,035
_A0567
Rru_A0568: Rru_A0568 - chemotaxis sensory transducer (NCBI), at 674,130 to 676,118
_A0568
Rru_A0569: Rru_A0569 - Chorismate mutase (NCBI), at 676,379 to 676,723
_A0569
Group
Condition
Rru
_A0565
Rru
_A0566
Rru
_A0567
Rru
_A0568
Rru
_A0569
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
-0.0
-0.2
+0.1
-1.9
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
-0.1
-0.0
+0.1
-1.6
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
N.D.
-0.0
-0.3
-0.3
-0.6
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
N.D.
-0.3
-0.3
+0.0
-0.6
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
-0.2
-0.1
-0.3
-0.5
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
-0.1
-0.1
-0.5
-0.5
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
N.D.
-0.2
-0.1
-0.1
-0.6
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
-0.2
+0.3
-0.5
-0.6
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
N.D.
+0.6
+0.4
-0.9
-1.0
carbon source
Valeric 25 mM; anaerobic
N.D.
+0.0
-0.3
-0.6
+0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
-0.2
+0.2
-0.3
-0.5
light
Succinic Acid; Light intensity 18 uM
N.D.
+0.4
+0.1
-0.4
-0.7
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
N.D.
+0.1
-0.0
+0.1
-0.7
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
+0.5
-0.3
-0.3
-0.3
light
Succinic Acid; Light intensity 75 uM
N.D.
+0.5
-0.4
-0.1
-0.1
smn_rich
SMN_rich
N.D.
-0.1
-0.5
+0.4
+0.1
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
N.D.
+0.2
-0.0
+0.2
-0.4
light
acetate; Light intensity 18 uM
N.D.
+0.1
+0.5
-0.4
-0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
+0.3
-0.0
+0.4
-0.4
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
+0.6
-0.2
+0.1
-0.2
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
N.D.
-0.0
-0.2
+0.2
+0.4
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
-0.1
-0.1
-0.1
+0.7
carbon source
Valeric 25 mM; anaerobic
N.D.
-0.1
-0.2
+0.8
-0.1
carbon source
Hexanoic 21 mM; anaerobic
N.D.
-0.2
+0.0
+0.7
-0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
+0.8
+0.0
+0.2
-0.5
light
Succinic Acid; Light intensity 38 uM
N.D.
+0.6
+0.0
+0.0
-0.1
light
acetate; Light intensity 75 uM
N.D.
+0.1
+0.4
-0.1
+0.4
light
acetate; Light intensity 38 uM
N.D.
-0.0
+0.6
+0.4
+0.2
light
Succinic Acid; Light intensity 18 uM
N.D.
+0.5
-0.2
+0.2
+0.6
light
Succinic Acid; Light intensity 150 uM
N.D.
-0.1
+0.4
+0.7
+0.7
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