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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A0522 and Rru_A0523 are separated by 31 nucleotides
Rru_A0523 and Rru_A0524 are separated by 4 nucleotides
Rru_A0524 and Rru_A0525 are separated by 33 nucleotides
Rru_A0525 and Rru_A0526 are separated by 243 nucleotides
Rru_A0522: Rru_A0522 - Response regulator receiver domain protein (CheY) (NCBI), at 617,272 to 617,643
_A0522
Rru_A0523: Rru_A0523 - Two component CheB methylesterase (NCBI), at 617,675 to 618,838
_A0523
Rru_A0524: Rru_A0524 - MCP methyltransferase, CheR-type (NCBI), at 618,843 to 619,685
_A0524
Rru_A0525: Rru_A0525 - Two component Transcriptional regulator, Winged helix family (NCBI), at 619,719 to 620,438
_A0525
Rru_A0526: Rru_A0526 - ATPase FliI/YscN (NCBI), at 620,682 to 622,109
_A0526
Group
Condition
Rru
_A0522
Rru
_A0523
Rru
_A0524
Rru
_A0525
Rru
_A0526
light
acetate; Light intensity 18 uM
-0.3
-0.3
-0.0
-1.2
-0.1
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
+0.1
-0.3
+0.1
-1.7
+0.3
light
acetate; Light intensity 38 uM
-0.2
-0.0
-0.3
-0.7
+0.0
light
acetate; Light intensity 9 uM
-0.2
-0.2
-0.1
-0.6
+0.0
light
acetate; Light intensity 38 uM
+0.1
-0.2
-0.3
-0.8
+0.0
light
Succinic Acid; Light intensity 9 uM
-0.4
+0.0
+0.2
-1.2
+0.3
light
acetate; Light intensity 18 uM
+0.0
-0.2
+0.0
-1.0
+0.1
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
-0.2
-0.2
-0.2
-0.4
-0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.0
+0.1
-0.0
-1.2
+0.2
light
Succinic Acid; Light intensity 75 uM
+0.3
-0.2
-0.1
-0.9
-0.0
light
Succinic Acid; Light intensity 18 uM
+0.5
-0.0
+0.1
-1.3
-0.1
light
Succinic Acid; Light intensity 38 uM
-0.1
-0.0
+0.1
-0.8
+0.0
light
Succinic Acid; Light intensity 9 uM
+0.2
-0.1
+0.1
-0.9
-0.0
light
Succinic Acid; Light intensity 75 uM
-0.3
+0.1
+0.1
-0.7
+0.2
carbon source
Hexanoic 21 mM; anaerobic
-0.3
+0.0
+0.2
-0.5
+0.0
light
Succinic Acid; Light intensity 18 uM
-0.7
-0.0
+0.2
-0.3
+0.3
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-0.2
-0.2
+0.0
-0.3
+0.2
carbon source
Hexanoic 21 mM; anaerobic
-0.4
+0.1
+0.2
-0.6
+0.2
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.3
-0.2
-0.2
+0.3
+0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.4
+0.1
+0.3
-0.5
+0.4
light
Succinic Acid; Light intensity 150 uM
+1.1
-0.3
-0.2
-0.3
-0.2
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.4
+0.2
+0.4
-0.4
+0.4
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.3
+0.1
+0.2
+0.2
+0.3
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
-0.3
+0.4
+0.3
-0.1
+0.5
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
-0.0
+0.4
+0.1
-0.1
+0.5
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
-0.1
+0.3
+0.3
-0.0
+0.4
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.4
+0.2
+0.4
+0.4
+0.4
carbon source
Valeric 25 mM; anaerobic
-0.0
+0.4
+0.5
+0.5
-0.2
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.1
+0.4
+0.5
+0.1
+0.5
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.0
+0.5
+0.3
+0.3
+0.3
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