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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A0442 and Rru_A0443 are separated by 93 nucleotides
Rru_A0443 and Rru_A0444 are separated by 205 nucleotides
Rru_A0444 and Rru_A0445 overlap by 4 nucleotides
Rru_A0445 and Rru_A0446 are separated by 186 nucleotides
Rru_A0442: Rru_A0442 - FAD linked oxidase-like (NCBI), at 520,588 to 522,024
_A0442
Rru_A0443: Rru_A0443 - hypothetical protein (NCBI), at 522,118 to 522,768
_A0443
Rru_A0444: Rru_A0444 - Sua5/YciO/YrdC/YwlC (NCBI), at 522,974 to 523,942
_A0444
Rru_A0445: Rru_A0445 - 3(2),5 -bisphosphate nucleotidase (NCBI), at 523,939 to 524,721
_A0445
Rru_A0446: Rru_A0446 - hypothetical protein (NCBI), at 524,908 to 525,354
_A0446
Group
Condition
Rru
_A0442
Rru
_A0443
Rru
_A0444
Rru
_A0445
Rru
_A0446
anaerboic nitrogen source
Low light with ammonium chloride
N.D.
-0.1
N.D.
N.D.
-0.3
light
Succinic Acid; Light intensity 150 uM
N.D.
-0.5
N.D.
N.D.
+0.2
light
acetate; Light intensity 9 uM
N.D.
-0.5
N.D.
N.D.
+0.2
carbon source
Hexanoic 21 mM; anaerobic
N.D.
-0.5
N.D.
N.D.
+0.2
carbon source
Hexanoic 21 mM; anaerobic
N.D.
-0.3
N.D.
N.D.
+0.1
carbon source
Valeric 25 mM; anaerobic
N.D.
-0.3
N.D.
N.D.
+0.2
light
Succinic Acid; Light intensity 9 uM
N.D.
-0.3
N.D.
N.D.
+0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
-0.3
N.D.
N.D.
+0.1
light
acetate; Light intensity 18 uM
N.D.
-0.6
N.D.
N.D.
+0.5
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
N.D.
+0.2
N.D.
N.D.
-0.3
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
N.D.
+0.4
N.D.
N.D.
-0.5
light
acetate; Light intensity 38 uM
N.D.
-0.4
N.D.
N.D.
+0.3
carbon source
Hexanoic 21 mM; anaerobic
N.D.
-0.3
N.D.
N.D.
+0.2
light
Succinic Acid; Light intensity 38 uM
N.D.
-0.3
N.D.
N.D.
+0.3
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
N.D.
+0.4
N.D.
N.D.
-0.3
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
N.D.
+0.3
N.D.
N.D.
-0.3
light
Succinic Acid; Light intensity 9 uM
N.D.
-0.2
N.D.
N.D.
+0.2
carbon source
Hexanoic 21 mM; anaerobic
N.D.
-0.3
N.D.
N.D.
+0.4
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
-0.2
N.D.
N.D.
+0.3
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
+0.3
N.D.
N.D.
-0.2
light
Succinic Acid; Light intensity 75 uM
N.D.
-0.4
N.D.
N.D.
+0.5
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
+0.4
N.D.
N.D.
-0.3
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
+0.4
N.D.
N.D.
-0.2
light
acetate; Light intensity 18 uM
N.D.
+0.3
N.D.
N.D.
-0.2
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
N.D.
+0.2
N.D.
N.D.
+0.2
light
Succinic Acid; Light intensity 18 uM
N.D.
-0.4
N.D.
N.D.
+0.8
light
Succinic Acid; Light intensity 75 uM
N.D.
-0.1
N.D.
N.D.
+0.6
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
+0.1
N.D.
N.D.
+0.4
carbon source
Valeric 25 mM; anaerobic
N.D.
+0.3
N.D.
N.D.
+0.3
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
N.D.
+0.6
N.D.
N.D.
-0.1
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