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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A0429 and Rru_A0430 are separated by 80 nucleotides
Rru_A0430 and Rru_A0431 overlap by 4 nucleotides
Rru_A0431 and Rru_A0432 overlap by 4 nucleotides
Rru_A0432 and Rru_A0433 overlap by 4 nucleotides
Rru_A0429: Rru_A0429 - Guanylate kinase (NCBI), at 501,508 to 502,164
_A0429
Rru_A0430: Rru_A0430 - Ribonuclease BN (NCBI), at 502,245 to 503,186
_A0430
Rru_A0431: Rru_A0431 - 16S rRNA dimethylase (NCBI), at 503,183 to 504,049
_A0431
Rru_A0432: Rru_A0432 - 4-hydroxythreonine-4-phosphate dehydrogenase (NCBI), at 504,046 to 505,080
_A0432
Rru_A0433: Rru_A0433 - PpiC-type peptidyl-prolyl cis-trans isomerase (NCBI), at 505,077 to 506,411
_A0433
Group
Condition
Rru
_A0429
Rru
_A0430
Rru
_A0431
Rru
_A0432
Rru
_A0433
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
+0.1
N.D.
-5.7
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
-0.0
N.D.
-5.5
N.D.
carbon source
Succinate (C)
N.D.
+0.1
N.D.
-4.8
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
+0.0
N.D.
-4.3
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
N.D.
+0.0
N.D.
-4.1
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
+0.1
N.D.
-4.0
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
N.D.
-0.0
N.D.
-3.7
N.D.
light
acetate; Light intensity 18 uM
N.D.
+0.1
N.D.
-3.7
N.D.
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
N.D.
+0.0
N.D.
-3.5
N.D.
carbon source
Succinate (C)
N.D.
+0.1
N.D.
-3.1
N.D.
light
acetate; Light intensity 9 uM
N.D.
+0.1
N.D.
-3.1
N.D.
light
acetate; Light intensity 38 uM
N.D.
-0.1
N.D.
-2.7
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
-0.1
N.D.
-2.6
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
+0.1
N.D.
-2.6
N.D.
light
acetate; Light intensity 75 uM
N.D.
+0.1
N.D.
-2.5
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
+0.1
N.D.
-2.5
N.D.
carbon source
Succinate (C)
N.D.
+0.1
N.D.
-2.4
N.D.
smn_rich
SMN_rich
N.D.
+0.1
N.D.
-2.4
N.D.
carbon source
Succinate (C)_noKan
N.D.
-0.1
N.D.
-2.0
N.D.
light
acetate; Light intensity 38 uM
N.D.
+0.1
N.D.
-2.1
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
N.D.
+0.2
N.D.
-2.0
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
N.D.
+0.1
N.D.
-1.7
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
N.D.
+0.3
N.D.
-1.9
N.D.
smn_rich
SMN_rich_noKan
N.D.
-0.1
N.D.
-1.2
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
+0.2
N.D.
+1.1
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
+0.0
N.D.
+1.4
N.D.
light
Succinic Acid; Light intensity 75 uM
N.D.
+0.0
N.D.
+1.5
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
-0.3
N.D.
+2.1
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
+0.1
N.D.
+1.9
N.D.
light
Succinic Acid; Light intensity 150 uM
N.D.
+0.0
N.D.
+2.2
N.D.
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