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Protein
Homologs
Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A0426 and Rru_A0427 are separated by 273 nucleotides
Rru_A0427 and Rru_A0428 are separated by 245 nucleotides
Rru_A0428 and Rru_A0429 are separated by 12 nucleotides
Rru_A0429 and Rru_A0430 are separated by 80 nucleotides
Rru_A0426: Rru_A0426 - hypothetical protein (NCBI), at 498,977 to 499,318
_A0426
Rru_A0427: Rru_A0427 - Short-chain dehydrogenase/reductase SDR (NCBI), at 499,592 to 500,362
_A0427
Rru_A0428: Rru_A0428 - hypothetical protein (NCBI), at 500,608 to 501,495
_A0428
Rru_A0429: Rru_A0429 - Guanylate kinase (NCBI), at 501,508 to 502,164
_A0429
Rru_A0430: Rru_A0430 - Ribonuclease BN (NCBI), at 502,245 to 503,186
_A0430
Group
Condition
Rru
_A0426
Rru
_A0427
Rru
_A0428
Rru
_A0429
Rru
_A0430
light
Succinic Acid; Light intensity 18 uM
-0.9
-0.4
N.D.
N.D.
+0.2
carbon source
Hexanoic 21 mM; anaerobic
-0.6
-0.3
N.D.
N.D.
-0.1
carbon source
Hexanoic 21 mM; anaerobic
-0.8
-0.1
N.D.
N.D.
+0.0
carbon source
Hexanoic 21 mM; anaerobic
-0.4
-0.4
N.D.
N.D.
-0.0
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.6
-0.1
N.D.
N.D.
+0.0
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.5
-0.3
N.D.
N.D.
+0.1
carbon source
Valeric 25 mM; anaerobic
-0.5
-0.4
N.D.
N.D.
+0.2
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.2
-0.4
N.D.
N.D.
+0.0
light
Succinic Acid; Light intensity 75 uM
-0.4
-0.3
N.D.
N.D.
+0.0
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.6
+0.3
N.D.
N.D.
-0.3
light
Succinic Acid; Light intensity 75 uM
-0.3
-0.2
N.D.
N.D.
-0.0
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.3
-0.3
N.D.
N.D.
+0.1
carbon source
Hexanoic 21 mM; anaerobic
-0.4
+0.2
N.D.
N.D.
-0.2
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.4
-0.2
N.D.
N.D.
+0.2
carbon source
Valeric 25 mM; anaerobic
-0.4
+0.1
N.D.
N.D.
-0.0
carbon source
Succinate (C)_noKan
-0.4
+0.2
N.D.
N.D.
-0.1
carbon source
Valeric 25 mM; anaerobic
-0.7
+0.5
N.D.
N.D.
-0.0
smn_rich
SMN_rich_noKan
-0.2
+0.3
N.D.
N.D.
-0.0
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.2
+0.6
N.D.
N.D.
-0.1
light
Succinic Acid; Light intensity 18 uM
+0.1
+0.4
N.D.
N.D.
-0.2
light
Succinic Acid; Light intensity 150 uM
-0.1
+0.4
N.D.
N.D.
+0.0
light
acetate; Light intensity 38 uM
+0.3
+0.1
N.D.
N.D.
-0.1
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
+0.5
-0.1
N.D.
N.D.
+0.0
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.0
+0.3
N.D.
N.D.
+0.1
light
Succinic Acid; Light intensity 150 uM
+0.3
+0.3
N.D.
N.D.
-0.0
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.1
+0.5
N.D.
N.D.
+0.1
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
+0.2
+0.2
N.D.
N.D.
+0.3
light
acetate; Light intensity 38 uM
+0.5
+0.2
N.D.
N.D.
+0.1
light
acetate; Light intensity 9 uM
+0.4
+0.5
N.D.
N.D.
+0.1
light
acetate; Light intensity 18 uM
+0.8
+0.9
N.D.
N.D.
+0.1
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