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Protein
Homologs
Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A0364 and Rru_A0365 are separated by 361 nucleotides
Rru_A0365 and Rru_A0366 are separated by 1 nucleotides
Rru_A0366 and Rru_A0367 are separated by 192 nucleotides
Rru_A0367 and Rru_A0368 are separated by 32 nucleotides
Rru_A0364: Rru_A0364 - ubiquinol-cytochrome c reductase, iron-sulfur subunit (NCBI), at 438,597 to 439,148
_A0364
Rru_A0365: Rru_A0365 - tRNA/rRNA methyltransferase (SpoU) (NCBI), at 439,510 to 439,992
_A0365
Rru_A0366: Rru_A0366 - Polynucleotide adenylyltransferase region (NCBI), at 439,994 to 441,571
_A0366
Rru_A0367: Rru_A0367 - NUDIX hydrolase (NCBI), at 441,764 to 442,495
_A0367
Rru_A0368: Rru_A0368 - Protein of unknown function DUF1285 (NCBI), at 442,528 to 443,127
_A0368
Group
Condition
Rru
_A0364
Rru
_A0365
Rru
_A0366
Rru
_A0367
Rru
_A0368
carbon source
Hexanoic 21 mM; anaerobic
N.D.
-0.1
N.D.
-0.5
N.D.
carbon source
Hexanoic 21 mM; anaerobic
N.D.
-0.2
N.D.
-0.3
N.D.
light
Succinic Acid; Light intensity 75 uM
N.D.
-0.2
N.D.
-0.2
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
N.D.
-0.3
N.D.
+0.0
N.D.
carbon source
Valeric 25 mM; anaerobic
N.D.
-0.4
N.D.
+0.1
N.D.
carbon source
Hexanoic 21 mM; anaerobic
N.D.
+0.2
N.D.
-0.5
N.D.
light
Succinic Acid; Light intensity 150 uM
N.D.
+0.3
N.D.
-0.4
N.D.
light
Succinic Acid; Light intensity 18 uM
N.D.
+0.4
N.D.
-0.6
N.D.
light
acetate; Light intensity 75 uM
N.D.
+0.1
N.D.
-0.3
N.D.
light
acetate; Light intensity 38 uM
N.D.
-0.3
N.D.
+0.2
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
-0.2
N.D.
+0.3
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
-0.3
N.D.
+0.4
N.D.
smn_rich
SMN_rich
N.D.
+0.2
N.D.
-0.1
N.D.
carbon source
Succinate (C)_noKan
N.D.
+0.3
N.D.
-0.1
N.D.
light
Succinic Acid; Light intensity 18 uM
N.D.
-0.4
N.D.
+0.6
N.D.
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
N.D.
-0.1
N.D.
+0.3
N.D.
carbon source
Valeric 25 mM; anaerobic
N.D.
+0.4
N.D.
-0.0
N.D.
carbon source
Succinate (C)
N.D.
+0.3
N.D.
+0.0
N.D.
smn_rich
SMN_rich
N.D.
+0.2
N.D.
+0.1
N.D.
carbon source
Succinate (C)
N.D.
+0.4
N.D.
-0.0
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
+0.1
N.D.
+0.2
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
N.D.
+0.3
N.D.
+0.1
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
N.D.
+0.2
N.D.
+0.2
N.D.
light
Succinic Acid; Light intensity 150 uM
N.D.
+0.7
N.D.
-0.2
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
+0.6
N.D.
-0.0
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
+0.4
N.D.
+0.2
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
+0.5
N.D.
+0.1
N.D.
light
acetate; Light intensity 18 uM
N.D.
+0.3
N.D.
+0.3
N.D.
light
acetate; Light intensity 18 uM
N.D.
+0.2
N.D.
+0.5
N.D.
light
acetate; Light intensity 38 uM
N.D.
+0.4
N.D.
+0.4
N.D.
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