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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A0293 and Rru_A0294 are separated by 374 nucleotides
Rru_A0294 and Rru_A0295 are separated by 82 nucleotides
Rru_A0295 and Rru_A0296 are separated by 298 nucleotides
Rru_A0296 and Rru_AR0012 are separated by 224 nucleotides
Rru_A0293: Rru_A0293 - Ribosomal protein S1 (NCBI), at 358,078 to 359,799
_A0293
Rru_A0294: Rru_A0294 - Cytidylate kinase (NCBI), at 360,174 to 360,815
_A0294
Rru_A0295: Rru_A0295 - 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI), at 360,898 to 362,253
_A0295
Rru_A0296: Rru_A0296 - hypothetical protein (NCBI), at 362,552 to 362,881
_A0296
Rru_AR0012: Rru_AR0012 - tRNA-Ala (NCBI), at 363,106 to 363,181
_AR0012
Group
Condition
Rru
_A0293
Rru
_A0294
Rru
_A0295
Rru
_A0296
Rru
_AR0012
carbon source
Hexanoic 21 mM; anaerobic
N.D.
N.D.
N.D.
-5.6
N.D.
carbon source
Hexanoic 21 mM; anaerobic
N.D.
N.D.
N.D.
-5.4
N.D.
carbon source
Valeric 25 mM; anaerobic
N.D.
N.D.
N.D.
-4.2
N.D.
carbon source
Hexanoic 21 mM; anaerobic
N.D.
N.D.
N.D.
-3.7
N.D.
carbon source
Valeric 25 mM; anaerobic
N.D.
N.D.
N.D.
-2.8
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
N.D.
N.D.
-2.5
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
N.D.
N.D.
-2.2
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
N.D.
N.D.
-2.2
N.D.
carbon source
Hexanoic 21 mM; anaerobic
N.D.
N.D.
N.D.
-2.0
N.D.
carbon source
Hexanoic 21 mM; anaerobic
N.D.
N.D.
N.D.
-2.0
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
N.D.
N.D.
-2.0
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
N.D.
N.D.
-1.8
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
N.D.
N.D.
N.D.
-1.4
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
N.D.
N.D.
-1.3
N.D.
light
Succinic Acid; Light intensity 9 uM
N.D.
N.D.
N.D.
-1.2
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
N.D.
N.D.
N.D.
-1.1
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
N.D.
N.D.
-1.1
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
N.D.
N.D.
-1.1
N.D.
light
Succinic Acid; Light intensity 38 uM
N.D.
N.D.
N.D.
-1.1
N.D.
light
Succinic Acid; Light intensity 75 uM
N.D.
N.D.
N.D.
-1.1
N.D.
light
acetate; Light intensity 38 uM
N.D.
N.D.
N.D.
-1.1
N.D.
light
acetate; Light intensity 9 uM
N.D.
N.D.
N.D.
-1.0
N.D.
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
N.D.
N.D.
N.D.
-1.0
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
N.D.
N.D.
-0.9
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
N.D.
N.D.
N.D.
-0.8
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
N.D.
N.D.
-0.8
N.D.
light
Succinic Acid; Light intensity 150 uM
N.D.
N.D.
N.D.
+1.6
N.D.
light
acetate; Light intensity 18 uM
N.D.
N.D.
N.D.
+2.0
N.D.
light
acetate; Light intensity 38 uM
N.D.
N.D.
N.D.
+2.1
N.D.
light
Succinic Acid; Light intensity 150 uM
N.D.
N.D.
N.D.
+4.3
N.D.
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