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Homologs
Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A0265 and Rru_A0266 are separated by 150 nucleotides
Rru_A0266 and Rru_A0267 are separated by 89 nucleotides
Rru_A0267 and Rru_A0268 are separated by 39 nucleotides
Rru_A0268 and Rru_A0269 are separated by 305 nucleotides
Rru_A0265: Rru_A0265 - Electron-transferring-flavoproteindehydrogenase (NCBI), at 329,145 to 330,782
_A0265
Rru_A0266: Rru_A0266 - Phage SPO1 DNA polymerase-related protein (NCBI), at 330,933 to 331,880
_A0266
Rru_A0267: Rru_A0267 - Lytic transglycosylase, catalytic (NCBI), at 331,970 to 333,694
_A0267
Rru_A0268: Rru_A0268 - Molybdopterin binding domain (NCBI), at 333,734 to 334,282
_A0268
Rru_A0269: Rru_A0269 - hypothetical protein (NCBI), at 334,588 to 335,469
_A0269
Group
Condition
Rru
_A0265
Rru
_A0266
Rru
_A0267
Rru
_A0268
Rru
_A0269
carbon source
Hexanoic 21 mM; anaerobic
-2.7
N.D.
+0.1
-0.3
N.D.
carbon source
Hexanoic 21 mM; anaerobic
-2.2
N.D.
+0.0
-0.4
N.D.
carbon source
Hexanoic 21 mM; anaerobic
-2.0
N.D.
+0.2
-0.4
N.D.
carbon source
Succinate (C)_noKan
-2.2
N.D.
+0.0
-0.0
N.D.
carbon source
Valeric 25 mM; anaerobic
-1.5
N.D.
+0.1
-0.2
N.D.
carbon source
Succinate (C)_noKan
-1.5
N.D.
-0.0
+0.1
N.D.
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
-0.8
N.D.
-0.1
-0.5
N.D.
carbon source
Succinate (C)_noKan
-1.4
N.D.
-0.0
-0.0
N.D.
carbon source
Valeric 25 mM; anaerobic
-1.1
N.D.
-0.0
-0.1
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.4
N.D.
-0.2
-0.6
N.D.
carbon source
Hexanoic 21 mM; anaerobic
-1.4
N.D.
+0.2
+0.0
N.D.
carbon source
Valeric 25 mM; anaerobic
-1.0
N.D.
+0.1
-0.1
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.5
N.D.
-0.1
-0.4
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.3
N.D.
+0.0
-0.6
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
+0.1
N.D.
-0.1
-0.8
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.5
N.D.
+0.0
-0.1
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
+0.2
N.D.
-0.1
-0.8
N.D.
light
Succinic Acid; Light intensity 18 uM
-0.0
N.D.
-0.4
-0.2
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
-0.5
N.D.
-0.1
+0.1
N.D.
carbon source
Valeric 25 mM; anaerobic
-0.3
N.D.
-0.1
+0.3
N.D.
carbon source
Hexanoic 21 mM; anaerobic
-0.2
N.D.
-0.0
+0.3
N.D.
light
Succinic Acid; Light intensity 75 uM
+0.3
N.D.
+0.1
-0.3
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.6
N.D.
+0.1
-0.0
N.D.
light
Succinic Acid; Light intensity 18 uM
+0.2
N.D.
+0.6
-0.1
N.D.
light
acetate; Light intensity 18 uM
+0.7
N.D.
+0.3
+0.3
N.D.
light
acetate; Light intensity 75 uM
+1.6
N.D.
+0.3
+0.1
N.D.
light
acetate; Light intensity 18 uM
+1.4
N.D.
+0.4
+0.1
N.D.
light
acetate; Light intensity 38 uM
+2.0
N.D.
-0.0
+0.0
N.D.
light
Succinic Acid; Light intensity 150 uM
+2.7
N.D.
+0.2
-0.2
N.D.
light
Succinic Acid; Light intensity 150 uM
+4.0
N.D.
+0.3
+0.1
N.D.
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