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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A0256 and Rru_A0257 are separated by 70 nucleotides
Rru_A0257 and Rru_A0258 overlap by 4 nucleotides
Rru_A0258 and Rru_A0259 are separated by 109 nucleotides
Rru_A0259 and Rru_A0260 overlap by 8 nucleotides
Rru_A0256: Rru_A0256 - GCN5-related N-acetyltransferase (NCBI), at 317,739 to 318,245
_A0256
Rru_A0257: Rru_A0257 - Protein of unknown function DUF898 (NCBI), at 318,316 to 319,392
_A0257
Rru_A0258: Rru_A0258 - Peptidase M48, Ste24p (NCBI), at 319,389 to 320,447
_A0258
Rru_A0259: Rru_A0259 - Carbon starvation protein CstA (NCBI), at 320,557 to 322,602
_A0259
Rru_A0260: Rru_A0260 - Protein of unknown function DUF466 (NCBI), at 322,595 to 322,792
_A0260
Group
Condition
Rru
_A0256
Rru
_A0257
Rru
_A0258
Rru
_A0259
Rru
_A0260
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.1
-0.3
-0.8
-0.4
-0.5
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
+0.1
-0.1
-1.3
-0.6
-0.1
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-0.0
-0.1
-0.0
-0.7
-0.7
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.1
-0.3
-0.4
-0.3
-0.4
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-0.2
+0.0
-0.2
-0.6
-0.4
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.1
-0.4
+0.2
-0.6
-0.6
carbon source
Valeric 25 mM; anaerobic
-0.3
-0.1
+0.2
-0.1
-0.6
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.2
-0.1
+0.9
-0.5
-0.8
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
+0.2
-0.4
-0.2
-0.2
-0.1
light
Succinic Acid; Light intensity 18 uM
-0.3
-0.4
+0.2
+0.0
+0.1
carbon source
Valeric 25 mM; anaerobic
+0.1
+0.5
-0.6
-0.2
+0.0
carbon source
Valeric 25 mM; anaerobic
+0.1
+0.0
+0.6
-0.4
-0.5
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.0
-0.0
+0.7
-0.4
-0.4
light
Succinic Acid; Light intensity 75 uM
+0.0
+0.0
+0.4
-0.4
+0.1
light
acetate; Light intensity 38 uM
-0.3
+0.2
-0.0
-0.3
+0.4
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.2
+0.1
+1.2
-0.6
-0.5
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.3
+0.3
+0.4
-0.5
-0.2
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.6
+0.3
-0.3
-0.3
+0.0
light
acetate; Light intensity 18 uM
-0.1
+0.2
-0.3
+0.0
+0.6
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.7
+0.4
-0.3
-0.3
+0.0
carbon source
Hexanoic 21 mM; anaerobic
+0.4
+0.3
-0.1
-0.1
+0.1
light
Succinic Acid; Light intensity 18 uM
+0.2
+0.8
+0.4
-0.5
-0.1
light
acetate; Light intensity 75 uM
-0.1
+0.2
-0.3
+0.2
+0.8
light
Succinic Acid; Light intensity 38 uM
-0.1
+0.2
+0.9
-0.3
+0.2
light
acetate; Light intensity 18 uM
+0.1
+0.3
-0.3
+0.4
+0.6
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.3
-0.0
-0.4
+0.6
+0.7
light
Succinic Acid; Light intensity 75 uM
+0.3
+0.1
+0.9
-0.0
+0.1
light
Succinic Acid; Light intensity 150 uM
+0.1
+0.0
+0.8
+0.9
+1.5
light
acetate; Light intensity 38 uM
+0.1
-0.1
+1.9
+1.2
+1.3
light
Succinic Acid; Light intensity 150 uM
+0.5
+0.1
+1.0
+2.4
+3.1
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