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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A0248 and Rru_A0249 are separated by 74 nucleotides
Rru_A0249 and Rru_A0250 are separated by 12 nucleotides
Rru_A0250 and Rru_A0251 are separated by 2 nucleotides
Rru_A0251 and Rru_A0252 are separated by 161 nucleotides
Rru_A0248: Rru_A0248 - inner-membrane translocator (NCBI), at 308,360 to 309,376
_A0248
Rru_A0249: Rru_A0249 - ABC transporter component (NCBI), at 309,451 to 310,932
_A0249
Rru_A0250: Rru_A0250 - Xylulokinase (NCBI), at 310,945 to 312,441
_A0250
Rru_A0251: Rru_A0251 - Transcriptional Regulator, AraC family (NCBI), at 312,444 to 313,373
_A0251
Rru_A0252: Rru_A0252 - Zinc-containing alcohol dehydrogenase superfamily (NCBI), at 313,535 to 314,578
_A0252
Group
Condition
Rru
_A0248
Rru
_A0249
Rru
_A0250
Rru
_A0251
Rru
_A0252
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.8
-0.2
-0.2
-0.2
-0.3
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.7
-0.1
-0.2
-0.2
-0.3
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.3
-0.1
-0.1
-0.4
-0.2
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.2
-0.0
-0.1
-0.4
-0.2
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
-0.4
-0.2
-0.0
-0.1
-0.1
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
-0.4
-0.1
-0.1
-0.1
-0.1
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-0.1
-0.2
-0.1
-0.1
-0.3
carbon source
Hexanoic 21 mM; anaerobic
-0.1
-0.1
-0.4
-0.3
+0.0
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-0.0
-0.1
-0.0
-0.3
-0.2
light
acetate; Light intensity 9 uM
-0.1
-0.2
-0.1
-0.2
-0.0
light
acetate; Light intensity 75 uM
-0.1
-0.2
-0.2
+0.1
-0.2
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.1
-0.2
+0.2
-0.2
-0.0
carbon source
Valeric 25 mM; anaerobic
-0.1
-0.1
+0.1
-0.1
-0.2
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
+0.0
-0.2
-0.4
+0.1
+0.1
carbon source
Valeric 25 mM; anaerobic
-0.1
+0.0
-0.1
-0.3
+0.2
carbon source
Hexanoic 21 mM; anaerobic
-0.0
-0.0
-0.3
-0.3
+0.3
light
Succinic Acid; Light intensity 18 uM
-0.1
+0.2
+0.0
-0.2
-0.1
carbon source
Hexanoic 21 mM; anaerobic
+0.0
-0.1
+0.4
-0.2
-0.2
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.1
-0.1
-0.3
+0.2
+0.1
carbon source
Hexanoic 21 mM; anaerobic
+0.0
-0.0
+0.2
-0.2
-0.1
smn_rich
SMN_rich_noKan
-0.3
+0.0
+0.2
-0.1
+0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.1
+0.2
+0.1
-0.5
+0.3
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.1
-0.1
+0.3
+0.2
-0.2
carbon source
Valeric 25 mM; anaerobic
+0.1
-0.1
+0.4
+0.2
-0.4
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
+0.1
-0.1
+0.1
-0.0
+0.3
light
Succinic Acid; Light intensity 18 uM
+0.1
-0.2
+0.2
+0.2
+0.0
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
+0.3
-0.0
+0.5
-0.4
+0.2
light
acetate; Light intensity 18 uM
+0.2
-0.1
+0.3
+0.2
+0.1
light
Succinic Acid; Light intensity 150 uM
-0.2
-0.0
-0.0
+0.6
+0.7
light
acetate; Light intensity 38 uM
+0.3
-0.0
-0.1
+0.9
+0.1
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