Fitness for 5 genes in Rhodospirillum rubrum S1H

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500 ntRru_A0085 and Rru_A0086 overlap by 1 nucleotidesRru_A0086 and Rru_A0087 are separated by 1 nucleotidesRru_A0087 and Rru_A0088 are separated by 178 nucleotidesRru_A0088 and Rru_A0089 are separated by 120 nucleotides Rru_A0085: Rru_A0085 - Putative diguanylate cyclase (GGDEF domain) (NCBI), at 98,274 to 99,635 _A0085 Rru_A0086: Rru_A0086 - Protein of unknown function DUF188 (NCBI), at 99,635 to 100,087 _A0086 Rru_A0087: Rru_A0087 - HI0933-like protein (NCBI), at 100,089 to 101,330 _A0087 Rru_A0088: Rru_A0088 - Zinc-containing alcohol dehydrogenase superfamily (NCBI), at 101,509 to 102,531 _A0088 Rru_A0089: Rru_A0089 - ATP-dependent DNA helicase RecQ (NCBI), at 102,652 to 104,541 _A0089
Group Condition Rru_A0085 Rru_A0086 Rru_A0087 Rru_A0088 Rru_A0089
carbon source Hexanoic 21 mM; anaerobic +0.0 -1.4 -0.2 -0.2 -0.2
light acetate; Light intensity 9 uM -0.0 -1.0 +0.0 -0.6 +0.0
carbon source Valeric 25 mM; anaerobic -0.0 -1.2 +0.1 -0.2 -0.2
light acetate; Light intensity 18 uM -0.2 -1.0 +0.1 -0.2 +0.3
light Succinic Acid; Light intensity 9 uM -0.0 -1.5 +0.2 +0.1 +0.1
carbon source Valeric 25 mM; anaerobic -0.1 -0.8 +0.2 -0.3 -0.0
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light +0.1 -0.2 -0.4 +0.2 -0.6
carbon source Succinic Acid 31.25 mM; anaerobic -0.0 -0.7 +0.2 -0.3 -0.1
light Succinic Acid; Light intensity 75 uM +0.1 -0.8 -0.0 -0.3 +0.1
light Succinic Acid; Light intensity 9 uM -0.0 -0.7 +0.2 -0.3 -0.1
carbon source Valeric 25 mM; anaerobic -0.1 +0.4 -0.8 +0.2 -0.6
carbon source Hexanoic 21 mM; anaerobic -0.1 +0.4 -0.6 -0.1 -0.3
light acetate; Light intensity 38 uM -0.1 -1.1 +0.8 -1.0 +0.6
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light +0.2 -0.1 -0.5 +0.3 -0.6
smn_rich SMN_rich +0.1 -0.7 +0.0 +0.0 -0.2
light Succinic Acid; Light intensity 18 uM +0.0 -1.0 +0.0 +0.4 -0.1
light acetate; Light intensity 75 uM +0.0 -0.5 +0.4 -0.7 +0.2
light acetate; Light intensity 38 uM -0.1 -0.9 +0.2 +0.2 +0.1
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light +0.1 +0.3 -0.4 +0.1 -0.6
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light +0.1 +0.3 -0.2 +0.2 -0.6
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light +0.2 +0.5 -0.4 -0.0 -0.4
carbon source Succinate (C)_noKan +0.0 +0.5 -0.1 -0.3 -0.1
carbon source Hexanoic 21 mM; anaerobic +0.1 -0.3 +0.5 -0.1 -0.2
carbon source Succinic Acid 31.25 mM; anaerobic -0.1 +1.4 -1.2 +0.2 -0.1
carbon source Succinic Acid 31.25 mM; anaerobic +0.1 -0.2 +0.2 +0.3 -0.2
light Succinic Acid; Light intensity 18 uM +0.1 +0.0 +0.6 -0.5 +0.2
carbon source Succinic Acid 31.25 mM; anaerobic -0.1 +0.7 -0.2 +0.1 +0.0
anaerboic nitrogen source L-Malic Acid (C) and N2; anaerobic; high light +0.1 +0.7 +0.2 -0.1 -0.1
light Succinic Acid; Light intensity 150 uM +0.2 +0.1 +0.6 +0.1 +0.6
carbon source carbon source anaerobic Succinic Acid 31.25 mM +0.3 +2.7 -0.0 -0.2 -0.0
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