Fitness for 5 genes in Rhodospirillum rubrum S1H

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500 ntRru_B0038 and Rru_B0039 are separated by 122 nucleotidesRru_B0039 and Rru_B0040 are separated by 6 nucleotidesRru_B0040 and Rru_B0041 are separated by 147 nucleotidesRru_B0041 and Rru_B0042 are separated by 34 nucleotides Rru_B0038: Rru_B0038 - dTDP-4-dehydrorhamnose 3,5-epimerase (NCBI), at 38,320 to 38,886 _B0038 Rru_B0039: Rru_B0039 - Type I secretion system ATPase, PrtD (NCBI), at 39,009 to 40,766 _B0039 Rru_B0040: Rru_B0040 - Type I secretion membrane fusion protein, HlyD (NCBI), at 40,773 to 42,251 _B0040 Rru_B0041: Rru_B0041 - Transcriptional Regulator, XRE family (NCBI), at 42,399 to 42,710 _B0041 Rru_B0042: Rru_B0042 - hypothetical protein (NCBI), at 42,745 to 43,599 _B0042
Group Condition Rru_B0038 Rru_B0039 Rru_B0040 Rru_B0041 Rru_B0042
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light -0.3 -1.4 -1.7 -0.1 -0.7
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light -0.6 -1.3 -1.3 +0.0 -0.6
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light -0.7 -1.4 -1.3 +0.3 -0.8
carbon source carbon source anaerobic Succinic Acid 31.25 mM -2.7 +0.2 -0.0 -1.1 +0.3
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -0.0 -0.8 -1.1 +0.1 -0.5
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light +0.1 -0.7 -0.8 +0.4 -0.7
anaerboic nitrogen source Low light with ammonium chloride -2.0 -0.0 +0.0 +0.1 +0.1
anaerboic nitrogen source L-Malic Acid (C) and N2; no light -0.8 +0.0 -0.0 +0.0 -0.4
anaerboic nitrogen source Low light with N2 -1.6 +0.1 +0.1 +0.2 +0.1
light Succinic Acid; Light intensity 150 uM -1.0 +0.0 +0.1 -0.1 -0.2
carbon source Hexanoic 21 mM; anaerobic -1.3 -0.0 +0.3 +0.1 +0.0
carbon source Succinic Acid 31.25 mM; anaerobic -1.2 +0.1 +0.1 -0.0 +0.2
carbon source Hexanoic 21 mM; anaerobic -1.0 +0.0 +0.3 +0.1 -0.0
anaerboic nitrogen source L-Malic Acid (C) and N2; anaerobic; high light -1.0 +0.2 +0.1 +0.0 +0.1
anaerboic nitrogen source L-Malic Acid (C) and N2; anaerobic; high light -0.9 +0.1 +0.1 +0.2 +0.1
anaerboic nitrogen source L-Malic Acid (C) and N2; no light -0.8 +0.1 +0.1 +0.2 -0.1
carbon source Hexanoic 21 mM; anaerobic -0.9 +0.3 +0.1 +0.0 +0.2
light Succinic Acid; Light intensity 38 uM -0.6 +0.1 +0.2 +0.2 +0.3
light acetate; Light intensity 38 uM -0.5 +0.2 +0.3 +0.2 +0.1
light acetate; Light intensity 9 uM -0.6 +0.5 +0.4 +0.3 -0.1
carbon source Succinate (C) +0.5 +0.2 +0.1 -0.2 -0.2
carbon source Succinic Acid 31.25 mM; anaerobic +0.7 -0.1 +0.3 -0.2 -0.1
carbon source Succinic Acid 31.25 mM; anaerobic -0.5 +0.2 +0.2 +0.8 +0.0
carbon source Hexanoic 21 mM; anaerobic -0.4 +0.2 +0.1 +0.8 +0.1
light acetate; Light intensity 18 uM -0.2 +0.4 +0.3 +0.5 +0.0
carbon source Succinate (C)_noKan +0.9 +0.1 +0.1 +0.1 +0.1
light Succinic Acid; Light intensity 9 uM +1.0 +0.1 +0.2 +0.4 +0.1
carbon source Succinate (C)_noKan +1.6 +0.1 +0.0 +0.2 +0.1
light Succinic Acid; Light intensity 18 uM +1.3 -0.0 +0.6 +0.1 +0.1
carbon source Succinate (C)_noKan +2.0 +0.1 +0.0 +0.2 +0.2
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