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Protein
Homologs
Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_B0023 and Rru_B0024 are separated by 416 nucleotides
Rru_B0024 and Rru_B0025 are separated by 136 nucleotides
Rru_B0025 and Rru_B0026 are separated by 338 nucleotides
Rru_B0026 and Rru_B0027 are separated by 283 nucleotides
Rru_B0023: Rru_B0023 - hypothetical protein (NCBI), at 21,900 to 22,385
_B0023
Rru_B0024: Rru_B0024 - RepA-related protein (NCBI), at 22,802 to 23,734
_B0024
Rru_B0025: Rru_B0025 - hypothetical protein (NCBI), at 23,871 to 24,122
_B0025
Rru_B0026: Rru_B0026 - SapC (NCBI), at 24,461 to 25,255
_B0026
Rru_B0027: Rru_B0027 - ABC-2 (NCBI), at 25,539 to 26,258
_B0027
Group
Condition
Rru
_B0023
Rru
_B0024
Rru
_B0025
Rru
_B0026
Rru
_B0027
light
Succinic Acid; Light intensity 18 uM
-1.0
+0.0
-0.6
-0.5
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.3
-0.1
-1.2
+0.2
N.D.
carbon source
Hexanoic 21 mM; anaerobic
+0.2
-0.4
-1.2
+0.1
N.D.
carbon source
Hexanoic 21 mM; anaerobic
-0.2
-0.4
-0.5
+0.1
N.D.
carbon source
Hexanoic 21 mM; anaerobic
-0.1
-0.5
-0.5
+0.0
N.D.
light
Succinic Acid; Light intensity 75 uM
-0.3
-0.2
-0.6
-0.0
N.D.
carbon source
Hexanoic 21 mM; anaerobic
-0.1
-0.5
-0.5
+0.2
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
+0.0
-0.1
-0.7
-0.1
N.D.
carbon source
Succinate (C)_noKan
-0.2
+0.0
-0.6
-0.1
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.2
+0.0
-0.6
-0.3
N.D.
carbon source
Succinate (C)_noKan
-0.2
-0.0
-0.4
-0.2
N.D.
carbon source
Succinate (C)_noKan
+0.1
-0.0
-0.6
-0.2
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.3
+0.0
-0.7
-0.2
N.D.
smn_rich
SMN_rich_noKan
+0.1
-0.1
-0.7
+0.0
N.D.
carbon source
Valeric 25 mM; anaerobic
+0.0
-0.2
-0.7
+0.3
N.D.
carbon source
Valeric 25 mM; anaerobic
+0.2
-0.1
-0.4
-0.1
N.D.
light
Succinic Acid; Light intensity 9 uM
-0.2
+0.2
-0.4
+0.0
N.D.
carbon source
Hexanoic 21 mM; anaerobic
+0.1
-0.4
-0.3
+0.3
N.D.
light
acetate; Light intensity 38 uM
-0.4
-0.1
+0.6
-0.4
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.1
-0.2
-0.3
+0.3
N.D.
anaerboic nitrogen source
SMN_rich_anaerobic
+0.3
+0.2
-0.3
-0.1
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.0
+0.0
+0.4
-0.3
N.D.
smn_rich
SMN_rich_noKan
+0.4
+0.1
-0.4
+0.1
N.D.
light
acetate; Light intensity 75 uM
-0.3
+0.2
+0.4
-0.1
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.1
+0.0
+0.4
-0.3
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.2
+0.3
+0.3
-0.5
N.D.
light
Succinic Acid; Light intensity 150 uM
-0.1
-0.0
+0.7
-0.0
N.D.
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
-0.0
+0.0
+0.3
+0.3
N.D.
light
Succinic Acid; Light intensity 18 uM
+0.3
-0.3
+0.3
+0.4
N.D.
light
acetate; Light intensity 18 uM
+0.0
+0.1
+0.9
-0.1
N.D.
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