Gene info for Synpcc7942_0649 in Synechococcus elongatus PCC 7942

Name: rpoD1
Annotation: RNA polymerase sigma factor RpoD
Type 1: Protein-coding gene
Located on scaffold NC_007604, - strand, nucleotides 642,767 to 643,966
See nucleotide sequence around Synpcc7942_0649 or for all of scaffold NC_007604

Other databases: NCBI, IMG: 637799061, uniprot: P38023

Nearby Genes

500 ntcikA and hemL are separated by 57 nucleotideshemL and Synpcc7942_0646 are separated by 6 nucleotidesSynpcc7942_0646 and Synpcc7942_0647 are separated by 203 nucleotidesSynpcc7942_0647 and Synpcc7942_0648 are separated by 104 nucleotidesSynpcc7942_0648 and rpoD1 are separated by 72 nucleotidesrpoD1 and nat are separated by 207 nucleotidesnat and priA are separated by 81 nucleotidespriA and Synpcc7942_0652 overlap by 38 nucleotidesSynpcc7942_0652 and cdv1 overlap by 4 nucleotidescdv1 and ycf4 are separated by 1 nucleotides Synpcc7942_0644: cikA - GAF sensor hybrid histidine kinase, at 637,075 to 639,339 cikA Synpcc7942_0645: hemL - glutamate-1-semialdehyde aminotransferase, at 639,397 to 640,758 hemL Synpcc7942_0646: Synpcc7942_0646 - hypothetical protein, at 640,765 to 640,992 _0646 Synpcc7942_0647: Synpcc7942_0647 - hypothetical protein, at 641,196 to 641,738 _0647 Synpcc7942_0648: Synpcc7942_0648 - hypothetical protein, at 641,843 to 642,694 _0648 Synpcc7942_0649: rpoD1 - RNA polymerase sigma factor RpoD, at 642,767 to 643,966 rpoD1 Synpcc7942_0650: nat - hypothetical protein, at 644,174 to 644,659 nat Synpcc7942_0651: priA - primosome assembly protein PriA, at 644,741 to 647,161 priA Synpcc7942_0652: Synpcc7942_0652 - hypothetical protein, at 647,124 to 648,713 _0652 Synpcc7942_0653: cdv1 - Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family-like, at 648,710 to 649,441 cdv1 Synpcc7942_0654: ycf4 - photosystem I assembly protein Ycf4, at 649,443 to 650,009 ycf4
Locus Name Description Strand Phenotype
Synpcc7942_0644 cikA GAF sensor hybrid histidine kinase + strong
Synpcc7942_0645 hemL glutamate-1-semialdehyde aminotransferase + no data
Synpcc7942_0646 Synpcc7942_0646 hypothetical protein + insig.
Synpcc7942_0647 Synpcc7942_0647 hypothetical protein + sig.
Synpcc7942_0648 Synpcc7942_0648 hypothetical protein + strong
Synpcc7942_0649 rpoD1 RNA polymerase sigma factor RpoD - no data
Synpcc7942_0650 nat hypothetical protein - sig.
Synpcc7942_0651 priA primosome assembly protein PriA + no data
Synpcc7942_0652 Synpcc7942_0652 hypothetical protein - cofit
Synpcc7942_0653 cdv1 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family-like - no data
Synpcc7942_0654 ycf4 photosystem I assembly protein Ycf4 - no data

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