Gene info for SMc04383 in Sinorhizobium meliloti 1021

Updated annotation (from data): putative hydrolase, required for lysine catabolism
Rationale: PFam PF07063.9 (DUF1338). This gene is specifically important for utilizing lysine, and this phenotype is conserved. It might be the decarboxylating 2-oxoadipate hydrolase of the D-lysine oxidase pathway, which has not been linked to a gene, or the crotonyl-CoA hydratase in the glutaryl-CoA degradation pathway.
Original annotation: hypothetical protein
Type 1: Protein-coding gene
Located on scaffold NC_003047, + strand, nucleotides 3,583,247 to 3,584,647
See nucleotide sequence around SMc04383 or for all of scaffold NC_003047

Other databases: NCBI, IMG: 637184122, uniprot: Q92L09

Nearby Genes

500 ntSMc03900 and SMc03901 are separated by 225 nucleotidesSMc03901 and SMc04381 are separated by 57 nucleotidesSMc04381 and SMc04382 are separated by 176 nucleotidesSMc04382 and SMc04882 are separated by 440 nucleotidesSMc04882 and SMc04383 are separated by 113 nucleotidesSMc04383 and SMc04384 are separated by 10 nucleotidesSMc04384 and SMc04385 are separated by 34 nucleotidesSMc04385 and SMc04386 are separated by 16 nucleotidesSMc04386 and SMc04387 are separated by 188 nucleotidesSMc04387 and SMc04388 are separated by 145 nucleotides SMc03900: SMc03900 - cyclic beta-1,2-glucan ABc transporter, at 3,568,721 to 3,570,571 SMc03900 SMc03901: SMc03901 - hypothetical protein, at 3,570,797 to 3,571,909 SMc03901 SMc04381: SMc04381 - hypothetical protein, at 3,571,967 to 3,573,124 SMc04381 SMc04382: SMc04382 - beta-(1,2)-glucan production associated transmembrane protein, at 3,573,301 to 3,581,799 SMc04382 SMc04882: SMc04882 - transcriptional regulator, at 3,582,240 to 3,583,133 SMc04882 SMc04383: SMc04383 - putative hydrolase, required for lysine catabolism (from data), at 3,583,247 to 3,584,647 SMc04383 SMc04384: SMc04384 - (R)-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) (from data), at 3,584,658 to 3,586,079 SMc04384 SMc04385: SMc04385 - L-2-aminoadipate semialdehyde dehydrogenase (EC 1.2.1.31) (from data), at 3,586,114 to 3,587,646 SMc04385 SMc04386: SMc04386 - 2-aminoadipate:2-oxoglutarate aminotransferase (EC 2.6.1.39) (from data), at 3,587,663 to 3,588,895 SMc04386 SMc04387: SMc04387 - aldehyde dehydrogenase, at 3,589,084 to 3,589,632 SMc04387 SMc04388: SMc04388 - beta alanine--pyruvate transaminase, at 3,589,778 to 3,591,115 SMc04388
Locus Name Description Strand Phenotype
SMc03900 SMc03900 cyclic beta-1,2-glucan ABc transporter + strong
SMc03901 SMc03901 hypothetical protein + insig.
SMc04381 SMc04381 hypothetical protein - cofit
SMc04382 SMc04382 beta-(1,2)-glucan production associated transmembrane protein - strong
SMc04882 SMc04882 transcriptional regulator - strong
SMc04383 SMc04383 putative hydrolase, required for lysine catabolism (from data) + strong
SMc04384 SMc04384 (R)-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) (from data) + strong
SMc04385 SMc04385 L-2-aminoadipate semialdehyde dehydrogenase (EC 1.2.1.31) (from data) + strong
SMc04386 SMc04386 2-aminoadipate:2-oxoglutarate aminotransferase (EC 2.6.1.39) (from data) + strong
SMc04387 SMc04387 aldehyde dehydrogenase - insig.
SMc04388 SMc04388 beta alanine--pyruvate transaminase + insig.

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