Gene info for SMc03165 in Sinorhizobium meliloti 1021

Updated annotation (from data): Novel Xylose regulator from LacI family
Rationale: Specifically important in carbon source D-Xylose. Also see expression evidence for the putative ortholog from Phaeobacter, PGA1_c13990, which is 41% identical (PMC4148808). (SEED_correct)
Original annotation: transcriptional regulator
Type 1: Protein-coding gene
Located on scaffold NC_003047, - strand, nucleotides 3,124,767 to 3,125,804
See nucleotide sequence around SMc03165 or for all of scaffold NC_003047

Other databases: NCBI, IMG: 637183721, uniprot: Q92LW7

Nearby Genes

500 ntSMc03160 and SMc03161 are separated by 256 nucleotidesSMc03161 and SMc03162 are separated by 207 nucleotidesSMc03162 and SMc03163 are separated by 192 nucleotidesSMc03163 and SMc03164 are separated by 94 nucleotidesSMc03164 and SMc03165 are separated by 9 nucleotidesSMc03165 and SMc03166 are separated by 95 nucleotidesSMc03166 and SMc03167 are separated by 169 nucleotidesSMc03167 and SMc03168 are separated by 28 nucleotidesSMc03168 and SMc03169 are separated by 305 nucleotidesSMc03169 and SMc03170 are separated by 119 nucleotides SMc03160: SMc03160 - beta-glucosidase, at 3,117,628 to 3,119,004 SMc03160 SMc03161: SMc03161 - oxidoreductase, at 3,119,261 to 3,120,445 SMc03161 SMc03162: SMc03162 - 3-ketoglucose dehydratase (from data), at 3,120,653 to 3,121,705 SMc03162 SMc03163: SMc03163 - Xylose isomerase (EC 5.3.1.5) (from data), at 3,121,898 to 3,123,208 SMc03163 SMc03164: SMc03164 - Xylulose kinase (EC 2.7.1.17) (from data), at 3,123,303 to 3,124,757 SMc03164 SMc03165: SMc03165 - Novel Xylose regulator from LacI family (from data), at 3,124,767 to 3,125,804 SMc03165 SMc03166: SMc03166 - hypothetical protein, at 3,125,900 to 3,126,985 SMc03166 SMc03167: SMc03167 - multidrug efflux system protein, at 3,127,155 to 3,128,744 SMc03167 SMc03168: SMc03168 - multidrug efflux system protein, at 3,128,773 to 3,129,921 SMc03168 SMc03169: SMc03169 - transcriptional regulator, at 3,130,227 to 3,130,937 SMc03169 SMc03170: SMc03170 - transcriptional regulator, at 3,131,057 to 3,131,896 SMc03170
Locus Name Description Strand Phenotype
SMc03160 SMc03160 beta-glucosidase - insig.
SMc03161 SMc03161 oxidoreductase - strong
SMc03162 SMc03162 3-ketoglucose dehydratase (from data) - strong
SMc03163 SMc03163 Xylose isomerase (EC 5.3.1.5) (from data) - strong
SMc03164 SMc03164 Xylulose kinase (EC 2.7.1.17) (from data) - strong
SMc03165 SMc03165 Novel Xylose regulator from LacI family (from data) - strong
SMc03166 SMc03166 hypothetical protein - insig.
SMc03167 SMc03167 multidrug efflux system protein - strong
SMc03168 SMc03168 multidrug efflux system protein - strong
SMc03169 SMc03169 transcriptional regulator + no data
SMc03170 SMc03170 transcriptional regulator + insig.

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