Gene info for SMc02570 in Sinorhizobium meliloti 1021

Updated annotation (from data): 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16)
Rationale: Important for fitness in most defined media. Semi-automated annotation based on the auxotrophic phenotype and a hit to HMM TIGR00007.
Original annotation: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Type 1: Protein-coding gene
Located on scaffold NC_003047, - strand, nucleotides 58,682 to 59,425
See nucleotide sequence around SMc02570 or for all of scaffold NC_003047

Other databases: NCBI, IMG: 637180825, uniprot: Q92TB2

Nearby Genes

500 ntSMc02564 and SMc02566 are separated by 104 nucleotidesSMc02566 and SMc02567 are separated by 613 nucleotidesSMc02567 and SMc02568 overlap by 4 nucleotidesSMc02568 and SMc02569 are separated by 64 nucleotidesSMc02569 and SMc02570 overlap by 4 nucleotidesSMc02570 and SMc02572 are separated by 32 nucleotidesSMc02572 and SMc02573 overlap by 1 nucleotidesSMc02573 and SMc02574 are separated by 26 nucleotidesSMc02574 and SMc02575 are separated by 320 nucleotidesSMc02575 and SMc02576 overlap by 11 nucleotides SMc02564: SMc02564 - LysM domain/BON superfamily protein, at 54,717 to 55,190 SMc02564 SMc02566: SMc02566 - alkylated DNA repair protein, at 55,295 to 55,915 SMc02566 SMc02567: SMc02567 - pantothenate kinase, at 56,529 to 57,524 SMc02567 SMc02568: SMc02568 - phosphoribosyl-ATP pyrophosphatase, at 57,521 to 57,844 SMc02568 SMc02569: SMc02569 - imidazole glycerol phosphate synthase subunit HisF, at 57,909 to 58,685 SMc02569 SMc02570: SMc02570 - 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data), at 58,682 to 59,425 SMc02570 SMc02572: SMc02572 - imidazole glycerol phosphate synthase subunit HisH, at 59,458 to 60,108 SMc02572 SMc02573: SMc02573 - hypothetical protein, at 60,108 to 60,581 SMc02573 SMc02574: SMc02574 - imidazoleglycerol-phosphate dehydratase, at 60,608 to 61,216 SMc02574 SMc02575: SMc02575 - ATP-dependent protease peptidase subunit, at 61,537 to 62,094 SMc02575 SMc02576: SMc02576 - acetyltransferase, at 62,084 to 62,605 SMc02576
Locus Name Description Strand Phenotype
SMc02564 SMc02564 LysM domain/BON superfamily protein + insig.
SMc02566 SMc02566 alkylated DNA repair protein + insig.
SMc02567 SMc02567 pantothenate kinase - no data
SMc02568 SMc02568 phosphoribosyl-ATP pyrophosphatase - no data
SMc02569 SMc02569 imidazole glycerol phosphate synthase subunit HisF - strong
SMc02570 SMc02570 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) - strong
SMc02572 SMc02572 imidazole glycerol phosphate synthase subunit HisH - strong
SMc02573 SMc02573 hypothetical protein - insig.
SMc02574 SMc02574 imidazoleglycerol-phosphate dehydratase - strong
SMc02575 SMc02575 ATP-dependent protease peptidase subunit + strong
SMc02576 SMc02576 acetyltransferase + insig.

Or browse nearby genes

Or see the comparative fitness browser