Gene info for SMa0247 in Sinorhizobium meliloti 1021

Updated annotation (from data): 2-dehydro-3-deoxy-D-arabinonate dehydratase, 2,4-dioxopentanoate forming
Rationale: Specifically important in carbon source D-Arabinose. SMa0247 is related to 2-keto-3-deoxyxylonate dehydratase (xylX), which acts on the same substrate. Furthermore, a close homolog (HSERO_RS19360, 59% identical) is important for D-xylose utilization. However, the product of XylX is 2,5-dioxopentanoate, but in S. meliloti the pathway probably proceeds via 2,4-dioxopentanoate (see SM_b21112).
Original annotation: hypothetical protein
Type 1: Protein-coding gene
Located on scaffold NC_003037, + strand, nucleotides 137,290 to 138,486
See nucleotide sequence around SMa0247 or for all of scaffold NC_003037

Other databases: NCBI, IMG: 637179546, uniprot: Q930R4

Nearby Genes

500 ntSMa0235 and SMa0237 are separated by 8 nucleotidesSMa0237 and SMa0241 overlap by 4 nucleotidesSMa0241 and SMa0244 are separated by 194 nucleotidesSMa0244 and SMa0246 are separated by 14 nucleotidesSMa0246 and SMa0247 are separated by 170 nucleotidesSMa0247 and SMa0249 are separated by 0 nucleotidesSMa0249 and SMa0250 overlap by 1 nucleotidesSMa0250 and SMa0252 are separated by 51 nucleotidesSMa0252 and SMa0254 are separated by 163 nucleotidesSMa0254 and SMa0255 are separated by 129 nucleotides SMa0235: SMa0235 - dihydroxy-acid dehydratase, at 131,106 to 132,884 SMa0235 SMa0237: SMa0237 - dehydrogenase, at 132,893 to 133,774 SMa0237 SMa0241: SMa0241 - epimerase, at 133,771 to 134,754 SMa0241 SMa0244: SMa0244 - Dehydrogenase, FAD-dependent, at 134,949 to 136,394 SMa0244 SMa0246: SMa0246 - GntR family transcriptional regulator, at 136,409 to 137,119 SMa0246 SMa0247: SMa0247 - 2-dehydro-3-deoxy-D-arabinonate dehydratase, 2,4-dioxopentanoate forming (from data), at 137,290 to 138,486 SMa0247 SMa0249: SMa0249 - TRAP-type small permease component, at 138,487 to 139,020 SMa0249 SMa0250: SMa0250 - dedA-like protein, at 139,020 to 140,297 SMa0250 SMa0252: SMa0252 - TRAP-type periplasmic solute-binding protein, at 140,349 to 141,353 SMa0252 SMa0254: SMa0254 - hypothetical protein, at 141,517 to 142,197 SMa0254 SMa0255: SMa0255 - DNA polymerase III subunit epsilon, at 142,327 to 143,304 SMa0255
Locus Name Description Strand Phenotype
SMa0235 SMa0235 dihydroxy-acid dehydratase - insig.
SMa0237 SMa0237 dehydrogenase - insig.
SMa0241 SMa0241 epimerase - insig.
SMa0244 SMa0244 Dehydrogenase, FAD-dependent + insig.
SMa0246 SMa0246 GntR family transcriptional regulator + sig.
SMa0247 SMa0247 2-dehydro-3-deoxy-D-arabinonate dehydratase, 2,4-dioxopentanoate forming (from data) + strong
SMa0249 SMa0249 TRAP-type small permease component + insig.
SMa0250 SMa0250 dedA-like protein + insig.
SMa0252 SMa0252 TRAP-type periplasmic solute-binding protein + insig.
SMa0254 SMa0254 hypothetical protein + insig.
SMa0255 SMa0255 DNA polymerase III subunit epsilon + insig.

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