Gene info for SM_b21648 in Sinorhizobium meliloti 1021

Updated annotation (from data): Alpha-galactosidase (EC 3.2.1.22)
Rationale: Specific phenotype: utilization of D-Raffinose pentahydrate (which is an alpha-galactoside)
Original annotation: alpha-galactosidase (melibiase) protein
Type 1: Protein-coding gene
Located on scaffold NC_003078, - strand, nucleotides 1,678,726 to 1,680,198
See nucleotide sequence around SM_b21648 or for all of scaffold NC_003078

Other databases: NCBI, uniprot: Q9X4Y0

Nearby Genes

500 ntSM_b21643 and SM_b21644 are separated by 20 nucleotidesSM_b21644 and SM_b21645 are separated by 11 nucleotidesSM_b21645 and SM_b21646 overlap by 4 nucleotidesSM_b21646 and SM_b21647 are separated by 117 nucleotidesSM_b21647 and SM_b21648 are separated by 288 nucleotidesSM_b21648 and SM_b21649 are separated by 195 nucleotidesSM_b21649 and SM_b21650 are separated by 70 nucleotidesSM_b21650 and SM_b21651 overlap by 18 nucleotides SM_b21643: SM_b21643 - alpha-galactosidase (melibiase) protein, at 1,671,025 to 1,672,398 _b21643 SM_b21644: SM_b21644 - ABC transporter for D-Raffinose, ATPase component (from data), at 1,672,419 to 1,674,089 _b21644 SM_b21645: SM_b21645 - ABC transporter for D-Raffinose, permease component 1 (from data), at 1,674,101 to 1,675,228 _b21645 SM_b21646: SM_b21646 - ABC transporter for D-Raffinose, permease component 2 (from data), at 1,675,225 to 1,676,238 _b21646 SM_b21647: SM_b21647 - ABC transporter for D-Raffinose, periplasmic substrate-binding protein (from data), at 1,676,356 to 1,678,437 _b21647 SM_b21648: SM_b21648 - Alpha-galactosidase (EC 3.2.1.22) (from data), at 1,678,726 to 1,680,198 _b21648 SM_b21649: SM_b21649 - AraC family transcriptional regulator, at 1,680,394 to 1,681,335 _b21649 SM_b21650: SM_b21650 - LacI family transcriptional regulator, at 1,681,406 to 1,682,485 _b21650 SM_b21651: SM_b21651 - plasmid stability protein, at 1,682,468 to 1,682,881 _b21651
Locus Name Description Strand Phenotype
SM_b21643 SM_b21643 alpha-galactosidase (melibiase) protein - strong
SM_b21644 SM_b21644 ABC transporter for D-Raffinose, ATPase component (from data) - strong
SM_b21645 SM_b21645 ABC transporter for D-Raffinose, permease component 1 (from data) - strong
SM_b21646 SM_b21646 ABC transporter for D-Raffinose, permease component 2 (from data) - strong
SM_b21647 SM_b21647 ABC transporter for D-Raffinose, periplasmic substrate-binding protein (from data) - strong
SM_b21648 SM_b21648 Alpha-galactosidase (EC 3.2.1.22) (from data) - strong
SM_b21649 SM_b21649 AraC family transcriptional regulator + strong
SM_b21650 SM_b21650 LacI family transcriptional regulator + strong
SM_b21651 SM_b21651 plasmid stability protein - insig.

Or browse nearby genes

Or see the comparative fitness browser