Gene info for RR42_RS32055 in Cupriavidus basilensis FW507-4G11

Updated annotation (from data): 3-carboxymuconate cycloisomerase PcaB (EC 5.5.1.2)
Rationale: Specifically important for 4-hydroxybenzoate utilization.
Original annotation: 3-carboxy-cis,cis-muconate cycloisomerase
Type 1: Protein-coding gene
Located on scaffold NZ_CP010537, - strand, nucleotides 2,568,754 to 2,570,079
See nucleotide sequence around RR42_RS32055 or for all of scaffold NZ_CP010537

Other databases: NCBI, uniprot: A0A0C4YE08

Nearby Genes

500 ntRR42_RS32030 and RR42_RS32035 are separated by 440 nucleotidesRR42_RS32035 and RR42_RS32040 are separated by 64 nucleotidesRR42_RS32040 and RR42_RS32045 overlap by 4 nucleotidesRR42_RS32045 and RR42_RS32050 are separated by 149 nucleotidesRR42_RS32050 and RR42_RS32055 are separated by 128 nucleotidesRR42_RS32055 and RR42_RS32060 are separated by 137 nucleotidesRR42_RS32060 and RR42_RS32065 are separated by 3 nucleotidesRR42_RS32065 and RR42_RS32070 are separated by 95 nucleotidesRR42_RS32070 and RR42_RS32075 are separated by 40 nucleotidesRR42_RS32075 and RR42_RS32080 are separated by 334 nucleotides RR42_RS32030: RR42_RS32030 - LuxR family transcriptional regulator, at 2,562,667 to 2,563,854 _RS32030 RR42_RS32035: RR42_RS32035 - short-chain dehydrogenase, at 2,564,295 to 2,565,104 _RS32035 RR42_RS32040: RR42_RS32040 - esterase, at 2,565,169 to 2,566,161 _RS32040 RR42_RS32045: RR42_RS32045 - 3,4-dihydroxy-2-butanone 4-phosphate synthase, at 2,566,158 to 2,567,282 _RS32045 RR42_RS32050: RR42_RS32050 - AraC family transcriptional regulator, at 2,567,432 to 2,568,625 _RS32050 RR42_RS32055: RR42_RS32055 - 3-carboxymuconate cycloisomerase PcaB (EC 5.5.1.2) (from data), at 2,568,754 to 2,570,079 _RS32055 RR42_RS32060: RR42_RS32060 - protocatechuate 3,4-dioxygenase, at 2,570,217 to 2,570,795 _RS32060 RR42_RS32065: RR42_RS32065 - protocatechuate 3,4-dioxygenase, beta subunit (EC 1.13.11.3) (from data), at 2,570,799 to 2,571,524 _RS32065 RR42_RS32070: RR42_RS32070 - LysR family transcriptional regulator, at 2,571,620 to 2,572,570 _RS32070 RR42_RS32075: RR42_RS32075 - EmrB/QacA subfamily drug resistance transporter, at 2,572,611 to 2,574,062 _RS32075 RR42_RS32080: RR42_RS32080 - filamentous hemagglutinin adhesin, at 2,574,397 to 2,582,430 _RS32080
Locus Name Description Strand Phenotype
RR42_RS32030 RR42_RS32030 LuxR family transcriptional regulator - insig.
RR42_RS32035 RR42_RS32035 short-chain dehydrogenase + insig.
RR42_RS32040 RR42_RS32040 esterase + insig.
RR42_RS32045 RR42_RS32045 3,4-dihydroxy-2-butanone 4-phosphate synthase + insig.
RR42_RS32050 RR42_RS32050 AraC family transcriptional regulator - cofit
RR42_RS32055 RR42_RS32055 3-carboxymuconate cycloisomerase PcaB (EC 5.5.1.2) (from data) - strong
RR42_RS32060 RR42_RS32060 protocatechuate 3,4-dioxygenase - strong
RR42_RS32065 RR42_RS32065 protocatechuate 3,4-dioxygenase, beta subunit (EC 1.13.11.3) (from data) - strong
RR42_RS32070 RR42_RS32070 LysR family transcriptional regulator + cofit
RR42_RS32075 RR42_RS32075 EmrB/QacA subfamily drug resistance transporter - insig.
RR42_RS32080 RR42_RS32080 filamentous hemagglutinin adhesin + insig.

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