Gene info for RR42_RS28860 in Cupriavidus basilensis FW507-4G11

Updated annotation (from data): 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45)
Rationale: Specifically important for utilizing D-Gluconic Acid sodium salt. Automated validation from mutant phenotype: the predicted function (2.7.1.45) was linked to the condition via a SEED subsystem. This annotation was also checked manually.
Original annotation: 2-dehydro-3-deoxygluconokinase
Type 1: Protein-coding gene
Located on scaffold NZ_CP010537, + strand, nucleotides 1,828,534 to 1,829,469
See nucleotide sequence around RR42_RS28860 or for all of scaffold NZ_CP010537

Other databases: NCBI, uniprot: A0A0C4YJP8

Nearby Genes

500 ntRR42_RS28835 and RR42_RS28840 are separated by 116 nucleotidesRR42_RS28840 and RR42_RS28845 are separated by 40 nucleotidesRR42_RS28845 and RR42_RS28850 are separated by 2 nucleotidesRR42_RS28850 and RR42_RS28855 are separated by 147 nucleotidesRR42_RS28855 and RR42_RS28860 are separated by 85 nucleotidesRR42_RS28860 and RR42_RS28865 are separated by 57 nucleotidesRR42_RS28865 and RR42_RS28870 are separated by 145 nucleotidesRR42_RS28870 and RR42_RS28875 are separated by 46 nucleotidesRR42_RS28875 and RR42_RS28880 are separated by 131 nucleotidesRR42_RS28880 and RR42_RS28885 are separated by 257 nucleotides RR42_RS28835: RR42_RS28835 - gluconate:H+ symporter (gntT) (from data), at 1,822,732 to 1,824,093 _RS28835 RR42_RS28840: RR42_RS28840 - hypothetical protein, at 1,824,210 to 1,824,602 _RS28840 RR42_RS28845: RR42_RS28845 - D-aminoacylase, at 1,824,643 to 1,826,136 _RS28845 RR42_RS28850: RR42_RS28850 - transcriptional regulator, at 1,826,139 to 1,827,032 _RS28850 RR42_RS28855: RR42_RS28855 - amino acid deaminase, at 1,827,180 to 1,828,448 _RS28855 RR42_RS28860: RR42_RS28860 - 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) (from data), at 1,828,534 to 1,829,469 _RS28860 RR42_RS28865: RR42_RS28865 - 2-dehydro-3-deoxyphosphogluconate aldolase, at 1,829,527 to 1,830,171 _RS28865 RR42_RS28870: RR42_RS28870 - phospholipase D, at 1,830,317 to 1,831,903 _RS28870 RR42_RS28875: RR42_RS28875 - hypothetical protein, at 1,831,950 to 1,832,081 _RS28875 RR42_RS28880: RR42_RS28880 - hypothetical protein, at 1,832,213 to 1,833,547 _RS28880 RR42_RS28885: RR42_RS28885 - membrane protein, at 1,833,805 to 1,835,118 _RS28885
Locus Name Description Strand Phenotype
RR42_RS28835 RR42_RS28835 gluconate:H+ symporter (gntT) (from data) - strong
RR42_RS28840 RR42_RS28840 hypothetical protein - insig.
RR42_RS28845 RR42_RS28845 D-aminoacylase - insig.
RR42_RS28850 RR42_RS28850 transcriptional regulator - insig.
RR42_RS28855 RR42_RS28855 amino acid deaminase + insig.
RR42_RS28860 RR42_RS28860 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) (from data) + strong
RR42_RS28865 RR42_RS28865 2-dehydro-3-deoxyphosphogluconate aldolase + no data
RR42_RS28870 RR42_RS28870 phospholipase D + insig.
RR42_RS28875 RR42_RS28875 hypothetical protein - insig.
RR42_RS28880 RR42_RS28880 hypothetical protein - insig.
RR42_RS28885 RR42_RS28885 membrane protein - strong

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