Gene info for RR42_RS25890 in Cupriavidus basilensis FW507-4G11

Updated annotation (from data): Branched-chain amino acid aminotransferase (EC 2.6.1.42)
Rationale: Specifically important for utilizing L-Isoleucine. Automated validation from mutant phenotype: the predicted function (BRANCHED-CHAINAMINOTRANSFERILEU-RXN) was linked to the condition via a MetaCyc pathway. This annotation was also checked manually.
Original annotation: branched-chain amino acid aminotransferase
Type 1: Protein-coding gene
Located on scaffold NZ_CP010537, + strand, nucleotides 1,149,447 to 1,150,538
See nucleotide sequence around RR42_RS25890 or for all of scaffold NZ_CP010537

Other databases: NCBI, uniprot: A0A0C4YJ32

Nearby Genes

500 ntRR42_RS25865 and RR42_RS25870 are separated by 396 nucleotidesRR42_RS25870 and RR42_RS25875 are separated by 128 nucleotidesRR42_RS25875 and RR42_RS25880 are separated by 105 nucleotidesRR42_RS25880 and RR42_RS25885 are separated by 477 nucleotidesRR42_RS25885 and RR42_RS25890 are separated by 247 nucleotidesRR42_RS25890 and RR42_RS25895 are separated by 148 nucleotidesRR42_RS25895 and RR42_RS25900 are separated by 268 nucleotidesRR42_RS25900 and RR42_RS25905 are separated by 9 nucleotidesRR42_RS25905 and RR42_RS25910 are separated by 31 nucleotidesRR42_RS25910 and RR42_RS25915 are separated by 91 nucleotides RR42_RS25865: RR42_RS25865 - LysR family transcriptional regulator, at 1,143,933 to 1,144,808 _RS25865 RR42_RS25870: RR42_RS25870 - fatty acid hydroxylase, at 1,145,205 to 1,146,329 _RS25870 RR42_RS25875: RR42_RS25875 - hypothetical protein, at 1,146,458 to 1,146,649 _RS25875 RR42_RS25880: RR42_RS25880 - hypothetical protein, at 1,146,755 to 1,147,579 _RS25880 RR42_RS25885: RR42_RS25885 - diguanylate cyclase, at 1,148,057 to 1,149,199 _RS25885 RR42_RS25890: RR42_RS25890 - Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data), at 1,149,447 to 1,150,538 _RS25890 RR42_RS25895: RR42_RS25895 - IclR family transcriptional regulator, at 1,150,687 to 1,151,460 _RS25895 RR42_RS25900: RR42_RS25900 - enoyl-CoA hydratase, at 1,151,729 to 1,152,505 _RS25900 RR42_RS25905: RR42_RS25905 - acetyl-CoA acetyltransferase, at 1,152,515 to 1,153,723 _RS25905 RR42_RS25910: RR42_RS25910 - acyl-CoA dehydrogenase, at 1,153,755 to 1,154,921 _RS25910 RR42_RS25915: RR42_RS25915 - ABC transporter substrate-binding protein, at 1,155,013 to 1,156,014 _RS25915
Locus Name Description Strand Phenotype
RR42_RS25865 RR42_RS25865 LysR family transcriptional regulator + insig.
RR42_RS25870 RR42_RS25870 fatty acid hydroxylase + insig.
RR42_RS25875 RR42_RS25875 hypothetical protein - insig.
RR42_RS25880 RR42_RS25880 hypothetical protein - insig.
RR42_RS25885 RR42_RS25885 diguanylate cyclase + insig.
RR42_RS25890 RR42_RS25890 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) + sig.
RR42_RS25895 RR42_RS25895 IclR family transcriptional regulator - insig.
RR42_RS25900 RR42_RS25900 enoyl-CoA hydratase + insig.
RR42_RS25905 RR42_RS25905 acetyl-CoA acetyltransferase + insig.
RR42_RS25910 RR42_RS25910 acyl-CoA dehydrogenase + insig.
RR42_RS25915 RR42_RS25915 ABC transporter substrate-binding protein + insig.

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