Gene info for RR42_RS06555 in Cupriavidus basilensis FW507-4G11

Updated annotation (from data): 3-oxoacid CoA-transferase (EC 2.8.3.5), subunit A
Rationale: Specifically important for utilizing L-Leucine. The B subunit is probably RR42_RS06560, but that gene lacks fitness data.
Original annotation: succinyl-CoA:3-ketoacid-CoA transferase
Type 1: Protein-coding gene
Located on scaffold NZ_CP010536, + strand, nucleotides 1,433,843 to 1,434,544
See nucleotide sequence around RR42_RS06555 or for all of scaffold NZ_CP010536

Other databases: NCBI, uniprot: A0A0C4Y765

Nearby Genes

500 ntRR42_RS06530 and RR42_RS06535 are separated by 69 nucleotidesRR42_RS06535 and RR42_RS06540 are separated by 236 nucleotidesRR42_RS06540 and RR42_RS06545 are separated by 210 nucleotidesRR42_RS06545 and RR42_RS06550 are separated by 125 nucleotidesRR42_RS06550 and RR42_RS06555 are separated by 173 nucleotidesRR42_RS06555 and RR42_RS06560 are separated by 11 nucleotidesRR42_RS06560 and RR42_RS06565 are separated by 95 nucleotidesRR42_RS06565 and RR42_RS06570 are separated by 14 nucleotidesRR42_RS06570 and RR42_RS06575 are separated by 202 nucleotidesRR42_RS06575 and RR42_RS06580 are separated by 62 nucleotides RR42_RS06530: RR42_RS06530 - C4-dicarboxylate ABC transporter, at 1,429,046 to 1,430,350 _RS06530 RR42_RS06535: RR42_RS06535 - C4-dicarboxylate ABC transporter, at 1,430,420 to 1,431,448 _RS06535 RR42_RS06540: RR42_RS06540 - hypothetical protein, at 1,431,685 to 1,432,389 _RS06540 RR42_RS06545: RR42_RS06545 - thioesterase, at 1,432,600 to 1,432,998 _RS06545 RR42_RS06550: RR42_RS06550 - LuxR family transcriptional regulator, at 1,433,124 to 1,433,669 _RS06550 RR42_RS06555: RR42_RS06555 - 3-oxoacid CoA-transferase (EC 2.8.3.5), subunit A (from data), at 1,433,843 to 1,434,544 _RS06555 RR42_RS06560: RR42_RS06560 - succinyl-CoA:3-ketoacid-CoA transferase, at 1,434,556 to 1,435,194 _RS06560 RR42_RS06565: RR42_RS06565 - metal-binding protein, at 1,435,290 to 1,435,784 _RS06565 RR42_RS06570: RR42_RS06570 - 3-hydroxybutyrate dehydrogenase, at 1,435,799 to 1,436,575 _RS06570 RR42_RS06575: RR42_RS06575 - alpha/beta hydrolase, at 1,436,778 to 1,437,665 _RS06575 RR42_RS06580: RR42_RS06580 - aminoacrylate peracid reductase, at 1,437,728 to 1,438,090 _RS06580
Locus Name Description Strand Phenotype
RR42_RS06530 RR42_RS06530 C4-dicarboxylate ABC transporter + insig.
RR42_RS06535 RR42_RS06535 C4-dicarboxylate ABC transporter + insig.
RR42_RS06540 RR42_RS06540 hypothetical protein + insig.
RR42_RS06545 RR42_RS06545 thioesterase + insig.
RR42_RS06550 RR42_RS06550 LuxR family transcriptional regulator - insig.
RR42_RS06555 RR42_RS06555 3-oxoacid CoA-transferase (EC 2.8.3.5), subunit A (from data) + strong
RR42_RS06560 RR42_RS06560 succinyl-CoA:3-ketoacid-CoA transferase + no data
RR42_RS06565 RR42_RS06565 metal-binding protein - insig.
RR42_RS06570 RR42_RS06570 3-hydroxybutyrate dehydrogenase - insig.
RR42_RS06575 RR42_RS06575 alpha/beta hydrolase + insig.
RR42_RS06580 RR42_RS06580 aminoacrylate peracid reductase + strong

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