Gene info for RR42_RS03990 in Cupriavidus basilensis FW507-4G11

Updated annotation (from data): aspartate:proton symporter Glt
Rationale: Specifically important for asparagine utilization. Asparagine is probably cleaved in the periplasm (by RR42_RS12610 or RR42_RS26140) and RR42_RS03990 is 60% identical to aspartate transporter AO356_01905 from Pseudomonas fluorescens FW300-N2C3
Original annotation: C4-dicarboxylate ABC transporter
Type 1: Protein-coding gene
Located on scaffold NZ_CP010536, - strand, nucleotides 881,471 to 882,781
See nucleotide sequence around RR42_RS03990 or for all of scaffold NZ_CP010536

Other databases: NCBI, uniprot: A0A0C4Y5S4

Nearby Genes

500 ntRR42_RS03965 and RR42_RS03970 are separated by 699 nucleotidesRR42_RS03970 and RR42_RS03975 are separated by 7 nucleotidesRR42_RS03975 and RR42_RS03980 are separated by 414 nucleotidesRR42_RS03980 and RR42_RS03985 are separated by 28 nucleotidesRR42_RS03985 and RR42_RS03990 are separated by 274 nucleotidesRR42_RS03990 and RR42_RS03995 are separated by 577 nucleotidesRR42_RS03995 and RR42_RS04000 are separated by 631 nucleotidesRR42_RS04000 and RR42_RS04005 are separated by 12 nucleotidesRR42_RS04005 and RR42_RS04010 are separated by 36 nucleotidesRR42_RS04010 and RR42_RS04015 overlap by 14 nucleotides RR42_RS03965: RR42_RS03965 - DNA-binding protein, at 874,823 to 875,425 _RS03965 RR42_RS03970: RR42_RS03970 - glycosyl transferase family 2, at 876,125 to 876,940 _RS03970 RR42_RS03975: RR42_RS03975 - acetyltransferase, at 876,948 to 877,514 _RS03975 RR42_RS03980: RR42_RS03980 - Fis family transcriptional regulator, at 877,929 to 879,251 _RS03980 RR42_RS03985: RR42_RS03985 - histidine kinase, at 879,280 to 881,196 _RS03985 RR42_RS03990: RR42_RS03990 - aspartate:proton symporter Glt (from data), at 881,471 to 882,781 _RS03990 RR42_RS03995: RR42_RS03995 - diguanylate cyclase, at 883,359 to 886,721 _RS03995 RR42_RS04000: RR42_RS04000 - (2Fe-2S)-binding protein, at 887,353 to 887,811 _RS04000 RR42_RS04005: RR42_RS04005 - carbon monoxide dehydrogenase, at 887,824 to 890,067 _RS04005 RR42_RS04010: RR42_RS04010 - transcriptional regulator, at 890,104 to 890,985 _RS04010 RR42_RS04015: RR42_RS04015 - RNA polymerase sigma factor, at 890,972 to 891,670 _RS04015
Locus Name Description Strand Phenotype
RR42_RS03965 RR42_RS03965 DNA-binding protein - insig.
RR42_RS03970 RR42_RS03970 glycosyl transferase family 2 - insig.
RR42_RS03975 RR42_RS03975 acetyltransferase - insig.
RR42_RS03980 RR42_RS03980 Fis family transcriptional regulator - strong
RR42_RS03985 RR42_RS03985 histidine kinase - strong
RR42_RS03990 RR42_RS03990 aspartate:proton symporter Glt (from data) - strong
RR42_RS03995 RR42_RS03995 diguanylate cyclase - insig.
RR42_RS04000 RR42_RS04000 (2Fe-2S)-binding protein + insig.
RR42_RS04005 RR42_RS04005 carbon monoxide dehydrogenase + insig.
RR42_RS04010 RR42_RS04010 transcriptional regulator - insig.
RR42_RS04015 RR42_RS04015 RNA polymerase sigma factor - insig.

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