Gene info for Pf6N2E2_612 in Pseudomonas fluorescens FW300-N2E2

Updated annotation (from data): Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26)
Rationale: Specifically important for utilizing L-Arabinose. Automated validation from mutant phenotype: the predicted function (25-DIOXOVALERATE-DEHYDROGENASE-RXN) was linked to the condition via a MetaCyc pathway. This annotation was also checked manually.
Original annotation: Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26)
Type 1: Protein-coding gene
Located on scaffold unitig_0|quiver.unitig_1|quiver|pilon, + strand, nucleotides 695,832 to 697,412
See nucleotide sequence around Pf6N2E2_612 or for all of scaffold unitig_0|quiver.unitig_1|quiver|pilon

Other databases: refseq: TK06_RS03030, uniprot: A0A159ZT83

Nearby Genes

500 ntPf6N2E2_607 and Pf6N2E2_608 are separated by 132 nucleotidesPf6N2E2_608 and Pf6N2E2_609 are separated by 349 nucleotidesPf6N2E2_609 and Pf6N2E2_610 are separated by 193 nucleotidesPf6N2E2_610 and Pf6N2E2_611 are separated by 219 nucleotidesPf6N2E2_611 and Pf6N2E2_612 are separated by 12 nucleotidesPf6N2E2_612 and Pf6N2E2_613 are separated by 118 nucleotidesPf6N2E2_613 and Pf6N2E2_614 overlap by 14 nucleotidesPf6N2E2_614 and Pf6N2E2_615 are separated by 156 nucleotidesPf6N2E2_615 and Pf6N2E2_616 are separated by 173 nucleotidesPf6N2E2_616 and Pf6N2E2_617 are separated by 143 nucleotides Pf6N2E2_607 - hypothetical protein, at 685,441 to 690,153 _607 Pf6N2E2_608 - Transcriptional regulator of the arabinose operon in Shewanella, GntR family, at 690,286 to 691,005 _608 Pf6N2E2_609 - L-arabonate dehydratase (EC 4.2.1.25) (from data), at 691,355 to 693,091 _609 Pf6N2E2_610 - Nitrate/nitrite transporter, at 693,285 to 694,607 _610 Pf6N2E2_611 - 2-dehydro-3-deoxy-L-arabinonate dehydratase (EC 4.2.1.43) (from data), at 694,827 to 695,819 _611 Pf6N2E2_612 - Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) (from data), at 695,832 to 697,412 _612 Pf6N2E2_613 - lipoprotein, putative, at 697,531 to 697,869 _613 Pf6N2E2_614 - 3-carboxymuconate cyclase, at 697,856 to 699,031 _614 Pf6N2E2_615 - FIG00957600: hypothetical protein, at 699,188 to 699,367 _615 Pf6N2E2_616 - hypothetical protein, at 699,541 to 699,666 _616 Pf6N2E2_617 - Probable glutathione S-transferase, at 699,810 to 700,412 _617
Locus Name Description Strand Phenotype
Pf6N2E2_607 hypothetical protein - insig.
Pf6N2E2_608 Transcriptional regulator of the arabinose operon in Shewanella, GntR family - strong
Pf6N2E2_609 L-arabonate dehydratase (EC 4.2.1.25) (from data) - strong
Pf6N2E2_610 Nitrate/nitrite transporter + strong
Pf6N2E2_611 2-dehydro-3-deoxy-L-arabinonate dehydratase (EC 4.2.1.43) (from data) + sig.
Pf6N2E2_612 Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) (from data) + strong
Pf6N2E2_613 lipoprotein, putative + insig.
Pf6N2E2_614 3-carboxymuconate cyclase + sig.
Pf6N2E2_615 FIG00957600: hypothetical protein + insig.
Pf6N2E2_616 hypothetical protein + no data
Pf6N2E2_617 Probable glutathione S-transferase - insig.

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