Gene info for Pf6N2E2_6062 in Pseudomonas fluorescens FW300-N2E2

Updated annotation (from data): 2-methylcitrate synthase (EC 2.3.3.5)
Rationale: Specifically important for utilizing Sodium propionate. Automated validation from mutant phenotype: the predicted function (2.3.3.5) was linked to the condition via a SEED subsystem. This annotation was also checked manually.
Original annotation: 2-methylcitrate synthase (EC 2.3.3.5)
Type 1: Protein-coding gene
Located on scaffold unitig_0|quiver.unitig_1|quiver|pilon, + strand, nucleotides 6,881,787 to 6,882,914
See nucleotide sequence around Pf6N2E2_6062 or for all of scaffold unitig_0|quiver.unitig_1|quiver|pilon

Other databases: refseq: TK06_RS30225, uniprot: A0A161GME4

Nearby Genes

500 ntPf6N2E2_6057 and Pf6N2E2_6058 overlap by 1 nucleotidesPf6N2E2_6058 and Pf6N2E2_6059 are separated by 32 nucleotidesPf6N2E2_6059 and Pf6N2E2_6060 are separated by 280 nucleotidesPf6N2E2_6060 and Pf6N2E2_6061 overlap by 4 nucleotidesPf6N2E2_6061 and Pf6N2E2_6062 are separated by 41 nucleotidesPf6N2E2_6062 and Pf6N2E2_6063 are separated by 177 nucleotidesPf6N2E2_6063 and Pf6N2E2_6064 are separated by 42 nucleotidesPf6N2E2_6064 and Pf6N2E2_6065 are separated by 336 nucleotidesPf6N2E2_6065 and Pf6N2E2_6066 are separated by 0 nucleotidesPf6N2E2_6066 and Pf6N2E2_6067 overlap by 1 nucleotides Pf6N2E2_6057 - FIG002781: Alpha-L-glutamate ligase family protein, at 6,876,813 to 6,877,799 _6057 Pf6N2E2_6058 - FIG139976: hypothetical protein, at 6,877,799 to 6,879,304 _6058 Pf6N2E2_6059 - FIG008443: hypothetical protein, at 6,879,337 to 6,879,873 _6059 Pf6N2E2_6060 - Propionate catabolism operon transcriptional regulator of GntR family [predicted], at 6,880,154 to 6,880,864 _6060 Pf6N2E2_6061 - Methylisocitrate lyase (EC 4.1.3.30) (from data), at 6,880,861 to 6,881,745 _6061 Pf6N2E2_6062 - 2-methylcitrate synthase (EC 2.3.3.5) (from data), at 6,881,787 to 6,882,914 _6062 Pf6N2E2_6063 - 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79), at 6,883,092 to 6,885,683 _6063 Pf6N2E2_6064 - 2-methylaconitate isomerase, at 6,885,726 to 6,886,919 _6064 Pf6N2E2_6065 - ABC transporter in pyoverdin gene cluster, periplasmic component, at 6,887,256 to 6,888,149 _6065 Pf6N2E2_6066 - ABC transporter in pyoverdin gene cluster, permease component, at 6,888,150 to 6,889,049 _6066 Pf6N2E2_6067 - ABC transporter in pyoverdin gene cluster, ATP-binding component, at 6,889,049 to 6,889,801 _6067
Locus Name Description Strand Phenotype
Pf6N2E2_6057 FIG002781: Alpha-L-glutamate ligase family protein - strong
Pf6N2E2_6058 FIG139976: hypothetical protein - strong
Pf6N2E2_6059 FIG008443: hypothetical protein - strong
Pf6N2E2_6060 Propionate catabolism operon transcriptional regulator of GntR family [predicted] + strong
Pf6N2E2_6061 Methylisocitrate lyase (EC 4.1.3.30) (from data) + strong
Pf6N2E2_6062 2-methylcitrate synthase (EC 2.3.3.5) (from data) + strong
Pf6N2E2_6063 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) + strong
Pf6N2E2_6064 2-methylaconitate isomerase + strong
Pf6N2E2_6065 ABC transporter in pyoverdin gene cluster, periplasmic component - insig.
Pf6N2E2_6066 ABC transporter in pyoverdin gene cluster, permease component - insig.
Pf6N2E2_6067 ABC transporter in pyoverdin gene cluster, ATP-binding component - insig.

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