Gene info for Pf6N2E2_5967 in Pseudomonas fluorescens FW300-N2E2

Updated annotation (from data): L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48)
Rationale: Important for utilization of L-arabinose and D-galactose in several Pseudomonas. Both of these sugars are catabolized via a 1-dehydrogenase followed by lactonase and dehydratase reactions. This is the only dehydrogenase is specifically important for either of these carbon sources in several Pseudomonas, except for an alpha-ketoglutarate semialdehyde dehydrogenase that is expected to be the last dedicated step in L-arabinose catabolism (i.e., Pf6N2E2_612). L-arabinose and D-galactose are chemically similar and some dehydrogenases are already known to act on both substrates. This gene might also be involved in D-gluconate utilization.
Original annotation: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
Type 1: Protein-coding gene
Located on scaffold unitig_0|quiver.unitig_1|quiver|pilon, + strand, nucleotides 6,785,647 to 6,786,465
See nucleotide sequence around Pf6N2E2_5967 or for all of scaffold unitig_0|quiver.unitig_1|quiver|pilon

Other databases: refseq: TK06_RS29720, uniprot: A0A165ZSW6

Nearby Genes

500 ntPf6N2E2_5962 and Pf6N2E2_5963 are separated by 985 nucleotidesPf6N2E2_5963 and Pf6N2E2_5964 are separated by 16 nucleotidesPf6N2E2_5964 and Pf6N2E2_5965 are separated by 162 nucleotidesPf6N2E2_5965 and Pf6N2E2_5966 overlap by 4 nucleotidesPf6N2E2_5966 and Pf6N2E2_5967 are separated by 236 nucleotidesPf6N2E2_5967 and Pf6N2E2_5968 are separated by 175 nucleotidesPf6N2E2_5968 and Pf6N2E2_5969 are separated by 75 nucleotidesPf6N2E2_5969 and Pf6N2E2_5970 are separated by 10 nucleotidesPf6N2E2_5970 and Pf6N2E2_5971 are separated by 153 nucleotidesPf6N2E2_5971 and Pf6N2E2_5972 are separated by 32 nucleotides Pf6N2E2_5962 - Molybdenum cofactor biosynthesis protein MoaA, at 6,780,493 to 6,781,461 _5962 Pf6N2E2_5963 - lipoprotein, putative, at 6,782,447 to 6,783,052 _5963 Pf6N2E2_5964 - FIG003620: Proteophosphoglycan precursor (Fragment), at 6,783,069 to 6,783,629 _5964 Pf6N2E2_5965 - transcriptional regulator, at 6,783,792 to 6,784,538 _5965 Pf6N2E2_5966 - L-arabinolactonase (EC 3.1.1.15) (from data), at 6,784,535 to 6,785,410 _5966 Pf6N2E2_5967 - L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) (from data), at 6,785,647 to 6,786,465 _5967 Pf6N2E2_5968 - ABC transporter for D-galactose/L-arabinose, substrate-binding component (from data), at 6,786,641 to 6,787,645 _5968 Pf6N2E2_5969 - ABC transporter for D-galactose/L-arabinose, ATPase component (from data), at 6,787,721 to 6,789,265 _5969 Pf6N2E2_5970 - ABC transporter for D-galactose/L-arabinose, permease component (from data), at 6,789,276 to 6,790,244 _5970 Pf6N2E2_5971 - ParE toxin protein, at 6,790,398 to 6,790,778 _5971 Pf6N2E2_5972 - hypothetical protein, at 6,790,811 to 6,791,155 _5972
Locus Name Description Strand Phenotype
Pf6N2E2_5962 Molybdenum cofactor biosynthesis protein MoaA + strong
Pf6N2E2_5963 lipoprotein, putative + strong
Pf6N2E2_5964 FIG003620: Proteophosphoglycan precursor (Fragment) + insig.
Pf6N2E2_5965 transcriptional regulator + sig.
Pf6N2E2_5966 L-arabinolactonase (EC 3.1.1.15) (from data) + strong
Pf6N2E2_5967 L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) (from data) + sig.
Pf6N2E2_5968 ABC transporter for D-galactose/L-arabinose, substrate-binding component (from data) + strong
Pf6N2E2_5969 ABC transporter for D-galactose/L-arabinose, ATPase component (from data) + strong
Pf6N2E2_5970 ABC transporter for D-galactose/L-arabinose, permease component (from data) + strong
Pf6N2E2_5971 ParE toxin protein - insig.
Pf6N2E2_5972 hypothetical protein - sig.

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