Gene info for Pf6N2E2_5405 in Pseudomonas fluorescens FW300-N2E2

Updated annotation (from data): ABC transporter for D-Alanine, ATPase component
Rationale: Very important for D-alanine utilization. This transporter may also uptake L-histidine.
Original annotation: ABC-type polar amino acid transport system, ATPase component
Type 1: Protein-coding gene
Located on scaffold unitig_0|quiver.unitig_1|quiver|pilon, + strand, nucleotides 6,210,902 to 6,211,666
See nucleotide sequence around Pf6N2E2_5405 or for all of scaffold unitig_0|quiver.unitig_1|quiver|pilon

Other databases: refseq: TK06_RS26975, uniprot: A0A0D9AS17

Nearby Genes

500 ntPf6N2E2_5400 and Pf6N2E2_5401 are separated by 99 nucleotidesPf6N2E2_5401 and Pf6N2E2_5402 are separated by 473 nucleotidesPf6N2E2_5402 and Pf6N2E2_5403 are separated by 119 nucleotidesPf6N2E2_5403 and Pf6N2E2_5404 are separated by 10 nucleotidesPf6N2E2_5404 and Pf6N2E2_5405 are separated by 11 nucleotidesPf6N2E2_5405 and Pf6N2E2_5406 are separated by 59 nucleotidesPf6N2E2_5406 and Pf6N2E2_5407 overlap by 4 nucleotidesPf6N2E2_5407 and Pf6N2E2_5408 are separated by 164 nucleotidesPf6N2E2_5408 and Pf6N2E2_5409 are separated by 43 nucleotidesPf6N2E2_5409 and Pf6N2E2_5410 are separated by 87 nucleotides Pf6N2E2_5400 - ATP-dependent RNA helicase RhlB, at 6,204,799 to 6,206,274 _5400 Pf6N2E2_5401 - phospholipase/carboxylesterase family protein, at 6,206,374 to 6,207,030 _5401 Pf6N2E2_5402 - ABC transporter for D-Alanine, periplasmic substrate-binding component (from data), at 6,207,504 to 6,208,535 _5402 Pf6N2E2_5403 - ABC transporter for D-Alanine, permease component 2 (from data), at 6,208,655 to 6,209,782 _5403 Pf6N2E2_5404 - ABC transporter for D-Alanine, permease component 1 (from data), at 6,209,793 to 6,210,890 _5404 Pf6N2E2_5405 - ABC transporter for D-Alanine, ATPase component (from data), at 6,210,902 to 6,211,666 _5405 Pf6N2E2_5406 - FIG00958224: hypothetical protein, at 6,211,726 to 6,212,208 _5406 Pf6N2E2_5407 - hypothetical protein, at 6,212,205 to 6,212,516 _5407 Pf6N2E2_5408 - Transcriptional regulator, GntR family, at 6,212,681 to 6,213,340 _5408 Pf6N2E2_5409 - Cyanate transport protein CynX, at 6,213,384 to 6,214,688 _5409 Pf6N2E2_5410 - Ketosteroid isomerase-related protein, at 6,214,776 to 6,215,246 _5410
Locus Name Description Strand Phenotype
Pf6N2E2_5400 ATP-dependent RNA helicase RhlB - insig.
Pf6N2E2_5401 phospholipase/carboxylesterase family protein - sig.
Pf6N2E2_5402 ABC transporter for D-Alanine, periplasmic substrate-binding component (from data) + strong
Pf6N2E2_5403 ABC transporter for D-Alanine, permease component 2 (from data) + strong
Pf6N2E2_5404 ABC transporter for D-Alanine, permease component 1 (from data) + strong
Pf6N2E2_5405 ABC transporter for D-Alanine, ATPase component (from data) + strong
Pf6N2E2_5406 FIG00958224: hypothetical protein - strong
Pf6N2E2_5407 hypothetical protein - insig.
Pf6N2E2_5408 Transcriptional regulator, GntR family + insig.
Pf6N2E2_5409 Cyanate transport protein CynX + insig.
Pf6N2E2_5410 Ketosteroid isomerase-related protein + insig.

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