Gene info for Pf6N2E2_5403 in Pseudomonas fluorescens FW300-N2E2

Updated annotation (from data): ABC transporter for D-Alanine, permease component 2
Rationale: Very important for D-alanine utilization. This transporter may also uptake L-histidine.
Original annotation: Glutamate Aspartate transport system permease protein GltJ (TC 3.A.1.3.4)
Type 1: Protein-coding gene
Located on scaffold unitig_0|quiver.unitig_1|quiver|pilon, + strand, nucleotides 6,208,655 to 6,209,782
See nucleotide sequence around Pf6N2E2_5403 or for all of scaffold unitig_0|quiver.unitig_1|quiver|pilon

Other databases: refseq: TK06_RS26965, uniprot: A0A160A3G2

Nearby Genes

500 ntPf6N2E2_5398 and Pf6N2E2_5399 are separated by 1 nucleotidesPf6N2E2_5399 and Pf6N2E2_5400 are separated by 137 nucleotidesPf6N2E2_5400 and Pf6N2E2_5401 are separated by 99 nucleotidesPf6N2E2_5401 and Pf6N2E2_5402 are separated by 473 nucleotidesPf6N2E2_5402 and Pf6N2E2_5403 are separated by 119 nucleotidesPf6N2E2_5403 and Pf6N2E2_5404 are separated by 10 nucleotidesPf6N2E2_5404 and Pf6N2E2_5405 are separated by 11 nucleotidesPf6N2E2_5405 and Pf6N2E2_5406 are separated by 59 nucleotidesPf6N2E2_5406 and Pf6N2E2_5407 overlap by 4 nucleotidesPf6N2E2_5407 and Pf6N2E2_5408 are separated by 164 nucleotides Pf6N2E2_5398 - Ornithine cyclodeaminase (EC 4.3.1.12), at 6,203,710 to 6,203,892 _5398 Pf6N2E2_5399 - Ornithine cyclodeaminase (EC 4.3.1.12), at 6,203,894 to 6,204,661 _5399 Pf6N2E2_5400 - ATP-dependent RNA helicase RhlB, at 6,204,799 to 6,206,274 _5400 Pf6N2E2_5401 - phospholipase/carboxylesterase family protein, at 6,206,374 to 6,207,030 _5401 Pf6N2E2_5402 - ABC transporter for D-Alanine, periplasmic substrate-binding component (from data), at 6,207,504 to 6,208,535 _5402 Pf6N2E2_5403 - ABC transporter for D-Alanine, permease component 2 (from data), at 6,208,655 to 6,209,782 _5403 Pf6N2E2_5404 - ABC transporter for D-Alanine, permease component 1 (from data), at 6,209,793 to 6,210,890 _5404 Pf6N2E2_5405 - ABC transporter for D-Alanine, ATPase component (from data), at 6,210,902 to 6,211,666 _5405 Pf6N2E2_5406 - FIG00958224: hypothetical protein, at 6,211,726 to 6,212,208 _5406 Pf6N2E2_5407 - hypothetical protein, at 6,212,205 to 6,212,516 _5407 Pf6N2E2_5408 - Transcriptional regulator, GntR family, at 6,212,681 to 6,213,340 _5408
Locus Name Description Strand Phenotype
Pf6N2E2_5398 Ornithine cyclodeaminase (EC 4.3.1.12) - no data
Pf6N2E2_5399 Ornithine cyclodeaminase (EC 4.3.1.12) - insig.
Pf6N2E2_5400 ATP-dependent RNA helicase RhlB - insig.
Pf6N2E2_5401 phospholipase/carboxylesterase family protein - sig.
Pf6N2E2_5402 ABC transporter for D-Alanine, periplasmic substrate-binding component (from data) + strong
Pf6N2E2_5403 ABC transporter for D-Alanine, permease component 2 (from data) + strong
Pf6N2E2_5404 ABC transporter for D-Alanine, permease component 1 (from data) + strong
Pf6N2E2_5405 ABC transporter for D-Alanine, ATPase component (from data) + strong
Pf6N2E2_5406 FIG00958224: hypothetical protein - strong
Pf6N2E2_5407 hypothetical protein - insig.
Pf6N2E2_5408 Transcriptional regulator, GntR family + insig.

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