Gene info for Pf6N2E2_5290 in Pseudomonas fluorescens FW300-N2E2

Updated annotation (from data): Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
Rationale: Specifically important for utilizing L-Phenylalanine. Automated validation from mutant phenotype: the predicted function (1.13.11.5) was linked to the condition via a SEED subsystem. This annotation was also checked manually.
Original annotation: Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
Type 1: Protein-coding gene
Located on scaffold unitig_0|quiver.unitig_1|quiver|pilon, + strand, nucleotides 6,082,936 to 6,084,240
See nucleotide sequence around Pf6N2E2_5290 or for all of scaffold unitig_0|quiver.unitig_1|quiver|pilon

Other databases: refseq: TK06_RS26400, uniprot: A0A160A3D8

Nearby Genes

500 ntPf6N2E2_5285 and Pf6N2E2_5286 are separated by 22 nucleotidesPf6N2E2_5286 and Pf6N2E2_5287 are separated by 305 nucleotidesPf6N2E2_5287 and Pf6N2E2_5288 are separated by 131 nucleotidesPf6N2E2_5288 and Pf6N2E2_5289 overlap by 36 nucleotidesPf6N2E2_5289 and Pf6N2E2_5290 are separated by 151 nucleotidesPf6N2E2_5290 and Pf6N2E2_5291 are separated by 3 nucleotidesPf6N2E2_5291 and Pf6N2E2_5292 are separated by 10 nucleotidesPf6N2E2_5292 and Pf6N2E2_5293 are separated by 162 nucleotidesPf6N2E2_5293 and Pf6N2E2_5294 are separated by 187 nucleotidesPf6N2E2_5294 and Pf6N2E2_5295 are separated by 259 nucleotides Pf6N2E2_5285 - FIG067310: hypothetical protein, at 6,075,139 to 6,076,917 _5285 Pf6N2E2_5286 - FIG002188: hypothetical protein, at 6,076,940 to 6,078,307 _5286 Pf6N2E2_5287 - Transcriptional regulator, LuxR family, at 6,078,613 to 6,081,165 _5287 Pf6N2E2_5288 - hypothetical protein, at 6,081,297 to 6,081,998 _5288 Pf6N2E2_5289 - Transcriptional regulator, IclR family, at 6,081,963 to 6,082,784 _5289 Pf6N2E2_5290 - Homogentisate 1,2-dioxygenase (EC 1.13.11.5) (from data), at 6,082,936 to 6,084,240 _5290 Pf6N2E2_5291 - Fumarylacetoacetase (EC 3.7.1.2), at 6,084,244 to 6,085,548 _5291 Pf6N2E2_5292 - Maleylacetoacetate isomerase (EC 5.2.1.2) (from data), at 6,085,559 to 6,086,194 _5292 Pf6N2E2_5293 - Protein sirB1, at 6,086,357 to 6,087,160 _5293 Pf6N2E2_5294 - Leucine dehydrogenase (EC 1.4.1.9), at 6,087,348 to 6,088,367 _5294 Pf6N2E2_5295 - Serine hydroxymethyltransferase (EC 2.1.2.1), at 6,088,627 to 6,089,865 _5295
Locus Name Description Strand Phenotype
Pf6N2E2_5285 FIG067310: hypothetical protein + insig.
Pf6N2E2_5286 FIG002188: hypothetical protein + insig.
Pf6N2E2_5287 Transcriptional regulator, LuxR family + insig.
Pf6N2E2_5288 hypothetical protein + sig.
Pf6N2E2_5289 Transcriptional regulator, IclR family - insig.
Pf6N2E2_5290 Homogentisate 1,2-dioxygenase (EC 1.13.11.5) (from data) + strong
Pf6N2E2_5291 Fumarylacetoacetase (EC 3.7.1.2) + strong
Pf6N2E2_5292 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) + strong
Pf6N2E2_5293 Protein sirB1 - insig.
Pf6N2E2_5294 Leucine dehydrogenase (EC 1.4.1.9) + insig.
Pf6N2E2_5295 Serine hydroxymethyltransferase (EC 2.1.2.1) - strong

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