Gene info for Pf6N2E2_4680 in Pseudomonas fluorescens FW300-N2E2

Annotation: HTH-type transcriptional regulator BetI
Type 1: Protein-coding gene
Located on scaffold unitig_0|quiver.unitig_1|quiver|pilon, - strand, nucleotides 5,413,766 to 5,414,386
See nucleotide sequence around Pf6N2E2_4680 or for all of scaffold unitig_0|quiver.unitig_1|quiver|pilon

Other databases: refseq: TK06_RS23405, uniprot: A0A160A1Y1

Nearby Genes

500 ntPf6N2E2_4675 and Pf6N2E2_4676 overlap by 1 nucleotidesPf6N2E2_4676 and Pf6N2E2_4677 are separated by 295 nucleotidesPf6N2E2_4677 and Pf6N2E2_4678 overlap by 9 nucleotidesPf6N2E2_4678 and Pf6N2E2_4679 overlap by 19 nucleotidesPf6N2E2_4679 and Pf6N2E2_4680 are separated by 80 nucleotidesPf6N2E2_4680 and Pf6N2E2_4681 are separated by 512 nucleotidesPf6N2E2_4681 and Pf6N2E2_4682 overlap by 4 nucleotidesPf6N2E2_4682 and Pf6N2E2_4683 are separated by 71 nucleotidesPf6N2E2_4683 and Pf6N2E2_4684 are separated by 121 nucleotidesPf6N2E2_4684 and Pf6N2E2_4685 are separated by 75 nucleotides Pf6N2E2_4675 - TldE/PmbA family protein, Beta/Gamma-proteobacterial subgroup, at 5,407,222 to 5,408,559 _4675 Pf6N2E2_4676 - TldD family protein, Beta/Gamma-proteobacterial subgroup, at 5,408,559 to 5,410,001 _4676 Pf6N2E2_4677 - Choline dehydrogenase (EC 1.1.99.1), at 5,410,297 to 5,412,000 _4677 Pf6N2E2_4678 - hypothetical protein, at 5,411,992 to 5,412,231 _4678 Pf6N2E2_4679 - Betaine aldehyde dehydrogenase (EC 1.2.1.8), at 5,412,213 to 5,413,685 _4679 Pf6N2E2_4680 - HTH-type transcriptional regulator BetI, at 5,413,766 to 5,414,386 _4680 Pf6N2E2_4681 - ABC transporter for Carnitine, ATPase component (from data), at 5,414,899 to 5,416,077 _4681 Pf6N2E2_4682 - ABC transporter for Carnitine, permease component (from data), at 5,416,074 to 5,416,919 _4682 Pf6N2E2_4683 - L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1), at 5,416,991 to 5,417,938 _4683 Pf6N2E2_4684 - hypothetical protein, at 5,418,060 to 5,418,287 _4684 Pf6N2E2_4685 - L-serine dehydratase (EC 4.3.1.17), at 5,418,363 to 5,419,739 _4685
Locus Name Description Strand Phenotype
Pf6N2E2_4675 TldE/PmbA family protein, Beta/Gamma-proteobacterial subgroup - insig.
Pf6N2E2_4676 TldD family protein, Beta/Gamma-proteobacterial subgroup - insig.
Pf6N2E2_4677 Choline dehydrogenase (EC 1.1.99.1) - sig.
Pf6N2E2_4678 hypothetical protein + insig.
Pf6N2E2_4679 Betaine aldehyde dehydrogenase (EC 1.2.1.8) - sig.
Pf6N2E2_4680 HTH-type transcriptional regulator BetI - insig.
Pf6N2E2_4681 ABC transporter for Carnitine, ATPase component (from data) - strong
Pf6N2E2_4682 ABC transporter for Carnitine, permease component (from data) - strong
Pf6N2E2_4683 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) - strong
Pf6N2E2_4684 hypothetical protein - cofit
Pf6N2E2_4685 L-serine dehydratase (EC 4.3.1.17) + sig.

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