Gene info for Pf6N2E2_4542 in Pseudomonas fluorescens FW300-N2E2

Annotation: negative regulator of hrp expression HrpV
Type 1: Protein-coding gene
Located on scaffold unitig_0|quiver.unitig_1|quiver|pilon, - strand, nucleotides 5,274,662 to 5,275,039
See nucleotide sequence around Pf6N2E2_4542 or for all of scaffold unitig_0|quiver.unitig_1|quiver|pilon

Other databases: refseq: TK06_RS22735, uniprot: A0A160A3Y6

Nearby Genes

500 ntPf6N2E2_4537 and Pf6N2E2_4538 overlap by 1 nucleotidesPf6N2E2_4538 and Pf6N2E2_4539 are separated by 15 nucleotidesPf6N2E2_4539 and Pf6N2E2_4540 are separated by 419 nucleotidesPf6N2E2_4540 and Pf6N2E2_4541 are separated by 124 nucleotidesPf6N2E2_4541 and Pf6N2E2_4542 are separated by 206 nucleotidesPf6N2E2_4542 and Pf6N2E2_4543 are separated by 6 nucleotidesPf6N2E2_4543 and Pf6N2E2_4544 overlap by 4 nucleotidesPf6N2E2_4544 and Pf6N2E2_4545 are separated by 25 nucleotidesPf6N2E2_4545 and Pf6N2E2_4546 overlap by 14 nucleotidesPf6N2E2_4546 and Pf6N2E2_4547 are separated by 542 nucleotides Pf6N2E2_4537 - Type III secretion inner membrane protein (YscS,homologous to flagellar export components), at 5,271,079 to 5,271,333 _4537 Pf6N2E2_4538 - Type III secretion inner membrane protein (YscT,HrcT,SpaR,EscT,EpaR1,homologous to flagellar export components), at 5,271,333 to 5,272,130 _4538 Pf6N2E2_4539 - Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, homologous to flagellar export components), at 5,272,146 to 5,273,246 _4539 Pf6N2E2_4540 - hypothetical protein, at 5,273,666 to 5,273,881 _4540 Pf6N2E2_4541 - hypothetical protein, at 5,274,006 to 5,274,455 _4541 Pf6N2E2_4542 - negative regulator of hrp expression HrpV, at 5,274,662 to 5,275,039 _4542 Pf6N2E2_4543 - hypothetical protein, at 5,275,046 to 5,275,255 _4543 Pf6N2E2_4544 - Type III secretion outermembrane pore forming protein (YscC,MxiD,HrcC, InvG), at 5,275,252 to 5,277,369 _4544 Pf6N2E2_4545 - hypothetical protein, at 5,277,395 to 5,277,832 _4545 Pf6N2E2_4546 - hypothetical protein, at 5,277,819 to 5,278,043 _4546 Pf6N2E2_4547 - Type III secretion cytoplasmic protein (YscL), at 5,278,586 to 5,279,179 _4547
Locus Name Description Strand Phenotype
Pf6N2E2_4537 Type III secretion inner membrane protein (YscS,homologous to flagellar export components) + insig.
Pf6N2E2_4538 Type III secretion inner membrane protein (YscT,HrcT,SpaR,EscT,EpaR1,homologous to flagellar export components) + insig.
Pf6N2E2_4539 Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, homologous to flagellar export components) + insig.
Pf6N2E2_4540 hypothetical protein + insig.
Pf6N2E2_4541 hypothetical protein - insig.
Pf6N2E2_4542 negative regulator of hrp expression HrpV - insig.
Pf6N2E2_4543 hypothetical protein - insig.
Pf6N2E2_4544 Type III secretion outermembrane pore forming protein (YscC,MxiD,HrcC, InvG) - insig.
Pf6N2E2_4545 hypothetical protein - insig.
Pf6N2E2_4546 hypothetical protein - insig.
Pf6N2E2_4547 Type III secretion cytoplasmic protein (YscL) - insig.

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