Gene info for Pf6N2E2_3983 in Pseudomonas fluorescens FW300-N2E2

Annotation: Membrane bound c-di-GMP receptor LapD
Type 1: Protein-coding gene
Located on scaffold unitig_0|quiver.unitig_1|quiver|pilon, - strand, nucleotides 4,648,400 to 4,650,388
See nucleotide sequence around Pf6N2E2_3983 or for all of scaffold unitig_0|quiver.unitig_1|quiver|pilon

Other databases: refseq: TK06_RS19930, uniprot: A0A160A0F4

Nearby Genes

500 ntPf6N2E2_3978 and Pf6N2E2_3979 are separated by 19 nucleotidesPf6N2E2_3979 and Pf6N2E2_3980 are separated by 28 nucleotidesPf6N2E2_3980 and Pf6N2E2_3981 are separated by 358 nucleotidesPf6N2E2_3981 and Pf6N2E2_3982 are separated by 183 nucleotidesPf6N2E2_3982 and Pf6N2E2_3983 are separated by 202 nucleotidesPf6N2E2_3983 and Pf6N2E2_3984 are separated by 14 nucleotidesPf6N2E2_3984 and Pf6N2E2_3985 are separated by 232 nucleotidesPf6N2E2_3985 and Pf6N2E2_3986 are separated by 685 nucleotidesPf6N2E2_3986 and Pf6N2E2_3987 overlap by 4 nucleotidesPf6N2E2_3987 and Pf6N2E2_3988 are separated by 10 nucleotides Pf6N2E2_3978 - Type I secretion system, membrane fusion protein LapC, at 4,627,456 to 4,628,793 _3978 Pf6N2E2_3979 - Type I secretion system ATPase, LssB family LapB, at 4,628,813 to 4,630,978 _3979 Pf6N2E2_3980 - Type I secretion system, outer membrane component LapE, at 4,631,007 to 4,632,356 _3980 Pf6N2E2_3981 - T1SS secreted agglutinin RTX, at 4,632,715 to 4,647,675 _3981 Pf6N2E2_3982 - Tryptophan synthase beta chain like (EC 4.2.1.20), at 4,647,859 to 4,648,197 _3982 Pf6N2E2_3983 - Membrane bound c-di-GMP receptor LapD, at 4,648,400 to 4,650,388 _3983 Pf6N2E2_3984 - T1SS associated transglutaminase-like cysteine proteinase LapP, at 4,650,403 to 4,651,065 _3984 Pf6N2E2_3985 - Predicted regulator PutR for proline utilization, GntR family, at 4,651,298 to 4,651,990 _3985 Pf6N2E2_3986 - PROBABLE REMNANT OF A TRANSPOSASE GENE PROTEIN, at 4,652,676 to 4,653,452 _3986 Pf6N2E2_3987 - FIG00953743: hypothetical protein, at 4,653,449 to 4,654,381 _3987 Pf6N2E2_3988 - Non-ribosomal peptide synthetase modules and related proteins, at 4,654,392 to 4,657,811 _3988
Locus Name Description Strand Phenotype
Pf6N2E2_3978 Type I secretion system, membrane fusion protein LapC - strong
Pf6N2E2_3979 Type I secretion system ATPase, LssB family LapB - strong
Pf6N2E2_3980 Type I secretion system, outer membrane component LapE - strong
Pf6N2E2_3981 T1SS secreted agglutinin RTX + strong
Pf6N2E2_3982 Tryptophan synthase beta chain like (EC 4.2.1.20) + insig.
Pf6N2E2_3983 Membrane bound c-di-GMP receptor LapD - strong
Pf6N2E2_3984 T1SS associated transglutaminase-like cysteine proteinase LapP - strong
Pf6N2E2_3985 Predicted regulator PutR for proline utilization, GntR family + insig.
Pf6N2E2_3986 PROBABLE REMNANT OF A TRANSPOSASE GENE PROTEIN + insig.
Pf6N2E2_3987 FIG00953743: hypothetical protein + insig.
Pf6N2E2_3988 Non-ribosomal peptide synthetase modules and related proteins + insig.

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