Gene info for Pf6N2E2_3378 in Pseudomonas fluorescens FW300-N2E2

Annotation: tmRNA-binding protein SmpB
Type 1: Protein-coding gene
Located on scaffold unitig_0|quiver.unitig_1|quiver|pilon, + strand, nucleotides 3,908,656 to 3,909,138
See nucleotide sequence around Pf6N2E2_3378 or for all of scaffold unitig_0|quiver.unitig_1|quiver|pilon

Other databases: refseq: TK06_RS16875, uniprot: A0A0D0PHS9

Nearby Genes

500 ntPf6N2E2_3373 and Pf6N2E2_3374 are separated by 59 nucleotidesPf6N2E2_3374 and Pf6N2E2_3375 are separated by 11 nucleotidesPf6N2E2_3375 and Pf6N2E2_3376 are separated by 7 nucleotidesPf6N2E2_3376 and Pf6N2E2_3377 are separated by 84 nucleotidesPf6N2E2_3377 and Pf6N2E2_3378 are separated by 10 nucleotidesPf6N2E2_3378 and Pf6N2E2_3379 are separated by 195 nucleotidesPf6N2E2_3379 and Pf6N2E2_3380 are separated by 259 nucleotidesPf6N2E2_3380 and Pf6N2E2_3381 are separated by 150 nucleotidesPf6N2E2_3381 and Pf6N2E2_3382 overlap by 4 nucleotidesPf6N2E2_3382 and Pf6N2E2_3383 are separated by 167 nucleotides Pf6N2E2_3373 - Outer membrane lipoprotein SmpA, a component of the essential YaeT outer-membrane protein assembly complex, at 3,905,971 to 3,906,324 _3373 Pf6N2E2_3374 - UPF0125 protein yfjF, at 3,906,384 to 3,906,671 _3374 Pf6N2E2_3375 - Putative oligoketide cyclase/lipid transport protein, similarity with yeast ubiquinone-binding protein YOL008W, at 3,906,683 to 3,907,126 _3375 Pf6N2E2_3376 - Sodium-dependent transporter family protein, at 3,907,134 to 3,908,426 _3376 Pf6N2E2_3377 - hypothetical protein, at 3,908,511 to 3,908,645 _3377 Pf6N2E2_3378 - tmRNA-binding protein SmpB, at 3,908,656 to 3,909,138 _3378 Pf6N2E2_3379 - Lactate-responsive regulator LldR in Enterobacteria, GntR family, at 3,909,334 to 3,910,101 _3379 Pf6N2E2_3380 - L-lactate permease, at 3,910,361 to 3,912,058 _3380 Pf6N2E2_3381 - Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE, at 3,912,209 to 3,913,033 _3381 Pf6N2E2_3382 - Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF, at 3,913,030 to 3,913,593 _3382 Pf6N2E2_3383 - Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF, at 3,913,761 to 3,914,489 _3383
Locus Name Description Strand Phenotype
Pf6N2E2_3373 Outer membrane lipoprotein SmpA, a component of the essential YaeT outer-membrane protein assembly complex + strong
Pf6N2E2_3374 UPF0125 protein yfjF - no data
Pf6N2E2_3375 Putative oligoketide cyclase/lipid transport protein, similarity with yeast ubiquinone-binding protein YOL008W - no data
Pf6N2E2_3376 Sodium-dependent transporter family protein - sig.
Pf6N2E2_3377 hypothetical protein + no data
Pf6N2E2_3378 tmRNA-binding protein SmpB + no data
Pf6N2E2_3379 Lactate-responsive regulator LldR in Enterobacteria, GntR family - strong
Pf6N2E2_3380 L-lactate permease + strong
Pf6N2E2_3381 Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE + strong
Pf6N2E2_3382 Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF + strong
Pf6N2E2_3383 Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF + strong

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