Gene info for Pf6N2E2_2960 in Pseudomonas fluorescens FW300-N2E2

Updated annotation (from data): ABC transporter for L-Lysine, permease component 2
Rationale: Specific phenotype on Gly-Glu; L-Lysine. There is another dedicated transporter for the dipeptide gly-glu so the basis of that phenotype is unclear.
Original annotation: Histidine ABC transporter, permease protein HisM (TC 3.A.1.3.1)
Type 1: Protein-coding gene
Located on scaffold unitig_0|quiver.unitig_1|quiver|pilon, + strand, nucleotides 3,451,618 to 3,452,328
See nucleotide sequence around Pf6N2E2_2960 or for all of scaffold unitig_0|quiver.unitig_1|quiver|pilon

Other databases: refseq: TK06_RS14830, uniprot: A0A165ZC74

Nearby Genes

500 ntPf6N2E2_2955 and Pf6N2E2_2956 are separated by 207 nucleotidesPf6N2E2_2956 and Pf6N2E2_2957 overlap by 4 nucleotidesPf6N2E2_2957 and Pf6N2E2_2958 are separated by 362 nucleotidesPf6N2E2_2958 and Pf6N2E2_2959 are separated by 58 nucleotidesPf6N2E2_2959 and Pf6N2E2_2960 overlap by 4 nucleotidesPf6N2E2_2960 and Pf6N2E2_2961 are separated by 27 nucleotidesPf6N2E2_2961 and Pf6N2E2_2962 are separated by 13 nucleotidesPf6N2E2_2962 and Pf6N2E2_2963 are separated by 220 nucleotidesPf6N2E2_2963 and Pf6N2E2_2964 overlap by 1 nucleotidesPf6N2E2_2964 and Pf6N2E2_2965 are separated by 36 nucleotides Pf6N2E2_2955 - Mobile element protein, at 3,445,509 to 3,446,777 _2955 Pf6N2E2_2956 - mRNA 3-end processing factor, at 3,446,985 to 3,448,004 _2956 Pf6N2E2_2957 - ATP-dependent DNA ligase (EC 6.5.1.1) LigC, at 3,448,001 to 3,449,689 _2957 Pf6N2E2_2958 - ABC transporter for L-Lysine, periplasmic substrate-binding component (from data), at 3,450,052 to 3,450,834 _2958 Pf6N2E2_2959 - ABC transporter for L-Lysine, permease component 1 (from data), at 3,450,893 to 3,451,621 _2959 Pf6N2E2_2960 - ABC transporter for L-Lysine, permease component 2 (from data), at 3,451,618 to 3,452,328 _2960 Pf6N2E2_2961 - Succinylglutamate desuccinylase/aspartoacylase, at 3,452,356 to 3,453,474 _2961 Pf6N2E2_2962 - ABC transporter for L-Lysine, ATPase component (from data), at 3,453,488 to 3,454,252 _2962 Pf6N2E2_2963 - FIG003033: Helicase domain protein, at 3,454,473 to 3,456,959 _2963 Pf6N2E2_2964 - FIG006285: ICC-like protein phosphoesterase, at 3,456,959 to 3,457,615 _2964 Pf6N2E2_2965 - FIG00955308: hypothetical protein, at 3,457,652 to 3,457,858 _2965
Locus Name Description Strand Phenotype
Pf6N2E2_2955 Mobile element protein + no data
Pf6N2E2_2956 mRNA 3-end processing factor + insig.
Pf6N2E2_2957 ATP-dependent DNA ligase (EC 6.5.1.1) LigC + insig.
Pf6N2E2_2958 ABC transporter for L-Lysine, periplasmic substrate-binding component (from data) + sig.
Pf6N2E2_2959 ABC transporter for L-Lysine, permease component 1 (from data) + strong
Pf6N2E2_2960 ABC transporter for L-Lysine, permease component 2 (from data) + sig.
Pf6N2E2_2961 Succinylglutamate desuccinylase/aspartoacylase + insig.
Pf6N2E2_2962 ABC transporter for L-Lysine, ATPase component (from data) + insig.
Pf6N2E2_2963 FIG003033: Helicase domain protein + insig.
Pf6N2E2_2964 FIG006285: ICC-like protein phosphoesterase + insig.
Pf6N2E2_2965 FIG00955308: hypothetical protein - insig.

Or browse nearby genes

Or see the comparative fitness browser