Gene info for Pf6N2E2_2380 in Pseudomonas fluorescens FW300-N2E2

Updated annotation (from data): Nitrate reductase (EC 1.7.99.4)
Rationale: Specifically important for utilizing Sodium nitrate. Automated validation from mutant phenotype: the predicted function (1.7.99.4) was linked to the condition via a SEED subsystem. This annotation was also checked manually.
Original annotation: Assimilatory nitrate reductase large subunit (EC:1.7.99.4)
Type 1: Protein-coding gene
Located on scaffold unitig_0|quiver.unitig_1|quiver|pilon, + strand, nucleotides 2,817,700 to 2,820,417
See nucleotide sequence around Pf6N2E2_2380 or for all of scaffold unitig_0|quiver.unitig_1|quiver|pilon

Other databases: refseq: TK06_RS12025, uniprot: A0A165Z886

Nearby Genes

500 ntPf6N2E2_2375 and Pf6N2E2_2376 are separated by 370 nucleotidesPf6N2E2_2376 and Pf6N2E2_2377 are separated by 9 nucleotidesPf6N2E2_2377 and Pf6N2E2_2378 are separated by 455 nucleotidesPf6N2E2_2378 and Pf6N2E2_2379 overlap by 4 nucleotidesPf6N2E2_2379 and Pf6N2E2_2380 overlap by 1 nucleotidesPf6N2E2_2380 and Pf6N2E2_2381 are separated by 10 nucleotidesPf6N2E2_2381 and Pf6N2E2_2382 are separated by 197 nucleotidesPf6N2E2_2382 and Pf6N2E2_2383 are separated by 108 nucleotidesPf6N2E2_2383 and Pf6N2E2_2384 are separated by 295 nucleotidesPf6N2E2_2384 and Pf6N2E2_2385 are separated by 2 nucleotides Pf6N2E2_2375 - Response regulator NasT, at 2,810,637 to 2,811,212 _2375 Pf6N2E2_2376 - nitrate transporter (from data), at 2,811,583 to 2,812,794 _2376 Pf6N2E2_2377 - Serine/threonine protein kinase (EC 2.7.11.1), at 2,812,804 to 2,814,477 _2377 Pf6N2E2_2378 - Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data), at 2,814,933 to 2,817,386 _2378 Pf6N2E2_2379 - Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4), at 2,817,383 to 2,817,700 _2379 Pf6N2E2_2380 - Nitrate reductase (EC 1.7.99.4) (from data), at 2,817,700 to 2,820,417 _2380 Pf6N2E2_2381 - Uroporphyrinogen-III methyltransferase (EC 2.1.1.107), at 2,820,428 to 2,821,183 _2381 Pf6N2E2_2382 - Major porin and structural outer membrane porin OprF, at 2,821,381 to 2,822,415 _2382 Pf6N2E2_2383 - DNA-directed RNA polymerase specialized sigma subunit, sigma24-like, at 2,822,524 to 2,822,910 _2383 Pf6N2E2_2384 - CmpX, at 2,823,206 to 2,824,030 _2384 Pf6N2E2_2385 - CrfX protein, at 2,824,033 to 2,824,278 _2385
Locus Name Description Strand Phenotype
Pf6N2E2_2375 Response regulator NasT + sig.
Pf6N2E2_2376 nitrate transporter (from data) + strong
Pf6N2E2_2377 Serine/threonine protein kinase (EC 2.7.11.1) + insig.
Pf6N2E2_2378 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) + strong
Pf6N2E2_2379 Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) + no data
Pf6N2E2_2380 Nitrate reductase (EC 1.7.99.4) (from data) + strong
Pf6N2E2_2381 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) + sig.
Pf6N2E2_2382 Major porin and structural outer membrane porin OprF - no data
Pf6N2E2_2383 DNA-directed RNA polymerase specialized sigma subunit, sigma24-like - no data
Pf6N2E2_2384 CmpX - strong
Pf6N2E2_2385 CrfX protein - no data

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