Gene info for Pf6N2E2_2111 in Pseudomonas fluorescens FW300-N2E2

Updated annotation (from data): Dehydrocarnitine CoA-transferase and acetoacetate CoA-transferase, subunit A
Rationale: Very important on cartinine and also important on L-phenylalanine and L-leucine. Acts on dehydrocarnitine during carnitine catabolism to give dehydrocarnitine-CoA. Probably also acts on acetoacetate, which is an intermediate in the degradation of phenylalanine (via tyrosine and homogentistate) and leucine (from HMG-CoA lyase). Both substrates are 3-oxoacids, but not sure if succinyl-CoA is the source of the CoA as annotated. Note that acetoacetyl-CoA is probably cleaved to acetyl-CoA by _2113 (downstream). Similar to DhcA = PA1999.
Original annotation: Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5)
Type 1: Protein-coding gene
Located on scaffold unitig_0|quiver.unitig_1|quiver|pilon, + strand, nucleotides 2,508,111 to 2,508,809
See nucleotide sequence around Pf6N2E2_2111 or for all of scaffold unitig_0|quiver.unitig_1|quiver|pilon

Other databases: refseq: TK06_RS10665, uniprot: A0A159ZX12

Nearby Genes

500 ntPf6N2E2_2106 and Pf6N2E2_2107 are separated by 183 nucleotidesPf6N2E2_2107 and Pf6N2E2_2108 are separated by 269 nucleotidesPf6N2E2_2108 and Pf6N2E2_2109 are separated by 182 nucleotidesPf6N2E2_2109 and Pf6N2E2_2110 are separated by 29 nucleotidesPf6N2E2_2110 and Pf6N2E2_2111 are separated by 168 nucleotidesPf6N2E2_2111 and Pf6N2E2_2112 are separated by 35 nucleotidesPf6N2E2_2112 and Pf6N2E2_2113 are separated by 11 nucleotidesPf6N2E2_2113 and Pf6N2E2_2114 are separated by 688 nucleotidesPf6N2E2_2114 and Pf6N2E2_2115 are separated by 244 nucleotidesPf6N2E2_2115 and Pf6N2E2_2116 are separated by 19 nucleotides Pf6N2E2_2106 - hypothetical protein, at 2,504,697 to 2,504,882 _2106 Pf6N2E2_2107 - Conidiation-specific protein 10, at 2,505,066 to 2,505,446 _2107 Pf6N2E2_2108 - hypothetical protein, at 2,505,716 to 2,505,988 _2108 Pf6N2E2_2109 - NAD-dependent protein deacetylase of SIR2 family, at 2,506,171 to 2,507,010 _2109 Pf6N2E2_2110 - LysR family transcriptional regulator near succinyl-CoA:3-ketoacid-coenzyme A transferase, at 2,507,040 to 2,507,942 _2110 Pf6N2E2_2111 - Dehydrocarnitine CoA-transferase and acetoacetate CoA-transferase, subunit A (from data), at 2,508,111 to 2,508,809 _2111 Pf6N2E2_2112 - Dehydrocarnitine CoA-transferase and acetoacetate CoA-transferase, subunit B (from data), at 2,508,845 to 2,509,510 _2112 Pf6N2E2_2113 - Acetyl-CoA acetyltransferase (EC 2.3.1.9), at 2,509,522 to 2,510,703 _2113 Pf6N2E2_2114 - Predicted D-glucarate or D-galactorate regulator, GntR family, at 2,511,392 to 2,512,102 _2114 Pf6N2E2_2115 - Major facilitator family transporter, at 2,512,347 to 2,513,789 _2115 Pf6N2E2_2116 - Glucarate dehydratase (EC 4.2.1.40), at 2,513,809 to 2,515,152 _2116
Locus Name Description Strand Phenotype
Pf6N2E2_2106 hypothetical protein + insig.
Pf6N2E2_2107 Conidiation-specific protein 10 - no data
Pf6N2E2_2108 hypothetical protein - sig.
Pf6N2E2_2109 NAD-dependent protein deacetylase of SIR2 family + insig.
Pf6N2E2_2110 LysR family transcriptional regulator near succinyl-CoA:3-ketoacid-coenzyme A transferase - insig.
Pf6N2E2_2111 Dehydrocarnitine CoA-transferase and acetoacetate CoA-transferase, subunit A (from data) + strong
Pf6N2E2_2112 Dehydrocarnitine CoA-transferase and acetoacetate CoA-transferase, subunit B (from data) + strong
Pf6N2E2_2113 Acetyl-CoA acetyltransferase (EC 2.3.1.9) + sig.
Pf6N2E2_2114 Predicted D-glucarate or D-galactorate regulator, GntR family - insig.
Pf6N2E2_2115 Major facilitator family transporter + insig.
Pf6N2E2_2116 Glucarate dehydratase (EC 4.2.1.40) + insig.

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