Gene info for Pf6N2E2_2053 in Pseudomonas fluorescens FW300-N2E2

Updated annotation (from data): ABC transporter for D-Glucosamine, periplasmic substrate-binding component
Rationale: Specific phenotype on D-Glucosamine Hydrochloride.
Original annotation: Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2)
Type 1: Protein-coding gene
Located on scaffold unitig_0|quiver.unitig_1|quiver|pilon, - strand, nucleotides 2,443,763 to 2,444,611
See nucleotide sequence around Pf6N2E2_2053 or for all of scaffold unitig_0|quiver.unitig_1|quiver|pilon

Other databases: refseq: TK06_RS10390, uniprot: A0A159ZUY1

Nearby Genes

500 ntPf6N2E2_2048 and Pf6N2E2_2049 are separated by 234 nucleotidesPf6N2E2_2049 and Pf6N2E2_2050 are separated by 25 nucleotidesPf6N2E2_2050 and Pf6N2E2_2051 overlap by 4 nucleotidesPf6N2E2_2051 and Pf6N2E2_2052 are separated by 9 nucleotidesPf6N2E2_2052 and Pf6N2E2_2053 are separated by 54 nucleotidesPf6N2E2_2053 and Pf6N2E2_2054 are separated by 321 nucleotidesPf6N2E2_2054 and Pf6N2E2_2055 are separated by 78 nucleotidesPf6N2E2_2055 and Pf6N2E2_2056 overlap by 11 nucleotidesPf6N2E2_2056 and Pf6N2E2_2057 are separated by 66 nucleotidesPf6N2E2_2057 and Pf6N2E2_2058 are separated by 53 nucleotides Pf6N2E2_2048 - Transcriptional regulator, IclR family, at 2,440,175 to 2,440,939 _2048 Pf6N2E2_2049 - Bona fide RidA/YjgF/TdcF/RutC subgroup, at 2,441,174 to 2,441,560 _2049 Pf6N2E2_2050 - ABC transporter for D-Glucosamine, putative ATPase component (from data), at 2,441,586 to 2,442,377 _2050 Pf6N2E2_2051 - ABC transporter for D-Glucosamine Hydrochloride, permease component 1 (from data), at 2,442,374 to 2,443,036 _2051 Pf6N2E2_2052 - ABC transporter for D-Glucosamine Hydrochloride, permease component 2 (from data), at 2,443,046 to 2,443,708 _2052 Pf6N2E2_2053 - ABC transporter for D-Glucosamine, periplasmic substrate-binding component (from data), at 2,443,763 to 2,444,611 _2053 Pf6N2E2_2054 - hypothetical protein, at 2,444,933 to 2,445,274 _2054 Pf6N2E2_2055 - StbE replicon stabilization toxin, at 2,445,353 to 2,445,634 _2055 Pf6N2E2_2056 - RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE), at 2,445,624 to 2,445,872 _2056 Pf6N2E2_2057 - Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipi n synthases and related enzymes, at 2,445,939 to 2,447,585 _2057 Pf6N2E2_2058 - ChlD component of cobalt chelatase involved in B12 biosynthesis, at 2,447,639 to 2,448,250 _2058
Locus Name Description Strand Phenotype
Pf6N2E2_2048 Transcriptional regulator, IclR family - sig.
Pf6N2E2_2049 Bona fide RidA/YjgF/TdcF/RutC subgroup - no data
Pf6N2E2_2050 ABC transporter for D-Glucosamine, putative ATPase component (from data) - no data
Pf6N2E2_2051 ABC transporter for D-Glucosamine Hydrochloride, permease component 1 (from data) - strong
Pf6N2E2_2052 ABC transporter for D-Glucosamine Hydrochloride, permease component 2 (from data) - strong
Pf6N2E2_2053 ABC transporter for D-Glucosamine, periplasmic substrate-binding component (from data) - sig.
Pf6N2E2_2054 hypothetical protein - insig.
Pf6N2E2_2055 StbE replicon stabilization toxin - insig.
Pf6N2E2_2056 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) - no data
Pf6N2E2_2057 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipi n synthases and related enzymes - strong
Pf6N2E2_2058 ChlD component of cobalt chelatase involved in B12 biosynthesis - no data

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