Gene info for Pf6N2E2_1668 in Pseudomonas fluorescens FW300-N2E2

Updated annotation (from data): Xylonate dehydratase (EC 4.2.1.82)
Rationale: Specifically important for utilizing D-Xylose. Automated validation from mutant phenotype: the predicted function (XYLONATE-DEHYDRATASE-RXN) was linked to the condition via a MetaCyc pathway. This annotation was also checked manually.
Original annotation: Xylonate dehydratase (EC 4.2.1.82)
Type 1: Protein-coding gene
Located on scaffold unitig_0|quiver.unitig_1|quiver|pilon, + strand, nucleotides 1,974,601 to 1,976,385
See nucleotide sequence around Pf6N2E2_1668 or for all of scaffold unitig_0|quiver.unitig_1|quiver|pilon

Other databases: refseq: TK06_RS08375, uniprot: A0A159ZXT5

Nearby Genes

500 ntPf6N2E2_1663 and Pf6N2E2_1664 overlap by 4 nucleotidesPf6N2E2_1664 and Pf6N2E2_1665 overlap by 6 nucleotidesPf6N2E2_1665 and Pf6N2E2_1666 are separated by 210 nucleotidesPf6N2E2_1666 and Pf6N2E2_1667 are separated by 113 nucleotidesPf6N2E2_1667 and Pf6N2E2_1668 are separated by 43 nucleotidesPf6N2E2_1668 and Pf6N2E2_1669 are separated by 134 nucleotidesPf6N2E2_1669 and Pf6N2E2_1670 are separated by 62 nucleotidesPf6N2E2_1670 and Pf6N2E2_1671 are separated by 24 nucleotidesPf6N2E2_1671 and Pf6N2E2_1672 are separated by 148 nucleotidesPf6N2E2_1672 and Pf6N2E2_1673 are separated by 19 nucleotides Pf6N2E2_1663 - 2-keto-3-deoxy-L-fuconate dehydrogenase, at 1,969,850 to 1,970,590 _1663 Pf6N2E2_1664 - Nitrate/nitrite transporter, at 1,970,587 to 1,971,969 _1664 Pf6N2E2_1665 - hypothetical protein, at 1,971,964 to 1,972,113 _1665 Pf6N2E2_1666 - Transcriptional regulator, LysR family, at 1,972,324 to 1,973,262 _1666 Pf6N2E2_1667 - Fumarylacetoacetate hydrolase family protein, at 1,973,376 to 1,974,557 _1667 Pf6N2E2_1668 - Xylonate dehydratase (EC 4.2.1.82) (from data), at 1,974,601 to 1,976,385 _1668 Pf6N2E2_1669 - Probable tautomerase, at 1,976,520 to 1,976,738 _1669 Pf6N2E2_1670 - conserved membrane protein, at 1,976,801 to 1,977,310 _1670 Pf6N2E2_1671 - Transcriptional regulator, TetR family, at 1,977,335 to 1,978,012 _1671 Pf6N2E2_1672 - hypothetical protein, at 1,978,161 to 1,979,042 _1672 Pf6N2E2_1673 - Transcriptional regulator, TetR family, at 1,979,062 to 1,979,499 _1673
Locus Name Description Strand Phenotype
Pf6N2E2_1663 2-keto-3-deoxy-L-fuconate dehydrogenase - sig.
Pf6N2E2_1664 Nitrate/nitrite transporter - strong
Pf6N2E2_1665 hypothetical protein + strong
Pf6N2E2_1666 Transcriptional regulator, LysR family - strong
Pf6N2E2_1667 Fumarylacetoacetate hydrolase family protein + insig.
Pf6N2E2_1668 Xylonate dehydratase (EC 4.2.1.82) (from data) + strong
Pf6N2E2_1669 Probable tautomerase + no data
Pf6N2E2_1670 conserved membrane protein + insig.
Pf6N2E2_1671 Transcriptional regulator, TetR family - sig.
Pf6N2E2_1672 hypothetical protein + strong
Pf6N2E2_1673 Transcriptional regulator, TetR family - sig.

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