Gene info for Pf6N2E2_1226 in Pseudomonas fluorescens FW300-N2E2

Updated annotation (from data): DNA damage response nuclease
Rationale: Conserved and specific phenotype: important for resisting cisplatin. Contains a VRR-NUC domain that is predicted to have nuclease activity.
Original annotation: Hypothetical protein, restriction endonuclease-like VRR-NUC domain
Type 1: Protein-coding gene
Located on scaffold unitig_0|quiver.unitig_1|quiver|pilon, - strand, nucleotides 1,434,468 to 1,436,138
See nucleotide sequence around Pf6N2E2_1226 or for all of scaffold unitig_0|quiver.unitig_1|quiver|pilon

Other databases: refseq: TK06_RS06175, uniprot: A0A159ZSZ5

Nearby Genes

500 ntPf6N2E2_1221 and Pf6N2E2_1222 are separated by 148 nucleotidesPf6N2E2_1222 and Pf6N2E2_1223 are separated by 153 nucleotidesPf6N2E2_1223 and Pf6N2E2_1224 are separated by 114 nucleotidesPf6N2E2_1224 and Pf6N2E2_1225 are separated by 49 nucleotidesPf6N2E2_1225 and Pf6N2E2_1226 overlap by 4 nucleotidesPf6N2E2_1226 and Pf6N2E2_1227 are separated by 220 nucleotidesPf6N2E2_1227 and Pf6N2E2_1228 are separated by 128 nucleotidesPf6N2E2_1228 and Pf6N2E2_1229 are separated by 169 nucleotidesPf6N2E2_1229 and Pf6N2E2_1230 are separated by 68 nucleotidesPf6N2E2_1230 and Pf6N2E2_1231 overlap by 7 nucleotides Pf6N2E2_1221 - sodium/hydrogen exchanger family protein, at 1,427,660 to 1,428,997 _1221 Pf6N2E2_1222 - FIG00954310: hypothetical protein, at 1,429,146 to 1,429,682 _1222 Pf6N2E2_1223 - Amino acid transporters, at 1,429,836 to 1,430,066 _1223 Pf6N2E2_1224 - Two-component hybrid sensor and regulator, at 1,430,181 to 1,432,109 _1224 Pf6N2E2_1225 - DinG family ATP-dependent helicase CPE1197, at 1,432,159 to 1,434,471 _1225 Pf6N2E2_1226 - DNA damage response nuclease (from data), at 1,434,468 to 1,436,138 _1226 Pf6N2E2_1227 - FIG00955097: hypothetical protein, at 1,436,359 to 1,436,583 _1227 Pf6N2E2_1228 - Lipase (EC 3.1.1.3), at 1,436,712 to 1,438,565 _1228 Pf6N2E2_1229 - Serine protease homologue, at 1,438,735 to 1,441,827 _1229 Pf6N2E2_1230 - Ferric iron ABC transporter, permease protein, at 1,441,896 to 1,442,084 _1230 Pf6N2E2_1231 - ABC-type protease exporter, outer membrane component PrtF/AprF, at 1,442,078 to 1,443,427 _1231
Locus Name Description Strand Phenotype
Pf6N2E2_1221 sodium/hydrogen exchanger family protein + insig.
Pf6N2E2_1222 FIG00954310: hypothetical protein - insig.
Pf6N2E2_1223 Amino acid transporters + insig.
Pf6N2E2_1224 Two-component hybrid sensor and regulator - sig.
Pf6N2E2_1225 DinG family ATP-dependent helicase CPE1197 - strong
Pf6N2E2_1226 DNA damage response nuclease (from data) - strong
Pf6N2E2_1227 FIG00955097: hypothetical protein + no data
Pf6N2E2_1228 Lipase (EC 3.1.1.3) - insig.
Pf6N2E2_1229 Serine protease homologue - insig.
Pf6N2E2_1230 Ferric iron ABC transporter, permease protein + no data
Pf6N2E2_1231 ABC-type protease exporter, outer membrane component PrtF/AprF - insig.

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