Gene info for Pf1N1B4_6033 in Pseudomonas fluorescens FW300-N1B4

Updated annotation (from data): D-ribose ABC transporter, permease component RbsC
Rationale: No fitness data for this gene, but the other putative components are upstream (Pf1N1B4_6035:Pf1N1B4_6034) and are specifically important for ribose utilization.
Original annotation: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
Type 1: Protein-coding gene
Located on scaffold unitig_3|quiver|pilon, - strand, nucleotides 496,959 to 497,936
See nucleotide sequence around Pf1N1B4_6033 or for all of scaffold unitig_3|quiver|pilon

Other databases: uniprot: A0A166R405

Nearby Genes

500 ntPf1N1B4_6028 and Pf1N1B4_6029 are separated by 38 nucleotidesPf1N1B4_6029 and Pf1N1B4_6030 are separated by 33 nucleotidesPf1N1B4_6030 and Pf1N1B4_6031 overlap by 4 nucleotidesPf1N1B4_6031 and Pf1N1B4_6032 are separated by 56 nucleotidesPf1N1B4_6032 and Pf1N1B4_6033 are separated by 3 nucleotidesPf1N1B4_6033 and Pf1N1B4_6034 overlap by 4 nucleotidesPf1N1B4_6034 and Pf1N1B4_6035 are separated by 56 nucleotidesPf1N1B4_6035 and Pf1N1B4_6036 are separated by 179 nucleotidesPf1N1B4_6036 and Pf1N1B4_6037 are separated by 336 nucleotidesPf1N1B4_6037 and Pf1N1B4_6038 are separated by 213 nucleotides Pf1N1B4_6028 - FIG00954052: hypothetical protein, at 493,254 to 493,460 _6028 Pf1N1B4_6029 - uridine nucleosidase (EC 3.2.2.3) (from data), at 493,499 to 494,527 _6029 Pf1N1B4_6030 - Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1), at 494,561 to 494,965 _6030 Pf1N1B4_6031 - Ribokinase (EC 2.7.1.15) (from data), at 494,962 to 495,879 _6031 Pf1N1B4_6032 - Ribose operon repressor, at 495,936 to 496,955 _6032 Pf1N1B4_6033 - D-ribose ABC transporter, permease component RbsC (from data), at 496,959 to 497,936 _6033 Pf1N1B4_6034 - D-ribose ABC transporter, ATPase component RbsA (from data), at 497,933 to 499,486 _6034 Pf1N1B4_6035 - D-ribose ABC transporter, substrate-binding component RbsB (from data), at 499,543 to 500,499 _6035 Pf1N1B4_6036 - FIG00953132: hypothetical protein, at 500,679 to 501,131 _6036 Pf1N1B4_6037 - L-asparaginase (EC 3.5.1.1), at 501,468 to 502,556 _6037 Pf1N1B4_6038 - FIG00953874: hypothetical protein, at 502,770 to 503,009 _6038
Locus Name Description Strand Phenotype
Pf1N1B4_6028 FIG00954052: hypothetical protein + insig.
Pf1N1B4_6029 uridine nucleosidase (EC 3.2.2.3) (from data) - sig.
Pf1N1B4_6030 Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) - insig.
Pf1N1B4_6031 Ribokinase (EC 2.7.1.15) (from data) - strong
Pf1N1B4_6032 Ribose operon repressor - insig.
Pf1N1B4_6033 D-ribose ABC transporter, permease component RbsC (from data) - no data
Pf1N1B4_6034 D-ribose ABC transporter, ATPase component RbsA (from data) - strong
Pf1N1B4_6035 D-ribose ABC transporter, substrate-binding component RbsB (from data) - sig.
Pf1N1B4_6036 FIG00953132: hypothetical protein - insig.
Pf1N1B4_6037 L-asparaginase (EC 3.5.1.1) + insig.
Pf1N1B4_6038 FIG00953874: hypothetical protein + insig.

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